RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 HNRNPH3P31942 346 aaKnown RBP12.52□□□□□ -0.41
LTBR-214ENST00000545445 PRKCIP41743 596 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 RPL10AP62906 217 aaKnown RBP12.52□□□□□ -0.41
LTBR-214ENST00000545445 ARHGAP8P85298 464 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 PLD1Q13393 1074 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 ORC1Q13415 861 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 ASIC2Q16515 512 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 LIN9Q5TKA1 542 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 TSSK4Q6SA08 328 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 PARM1Q6UWI2 310 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 SLC47A2Q86VL8 602 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 FUKQ8N0W3 1084 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 GPR161Q8N6U8 529 aaKnown RBP12.52□□□□□ -0.41
LTBR-214ENST00000545445 ANKRD52Q8NB46 1076 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 ATAD1Q8NBU5 361 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 SLC2A14Q8TDB8 520 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 ZNF606Q8WXB4 792 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 FGF14Q92915 247 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 SECISBP2LQ93073 1101 aaKnown RBP12.52□□□□□ -0.41
LTBR-214ENST00000545445 SHDQ96IW2 340 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 RTKNQ9BST9 563 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 EPC1Q9H2F5 836 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 CYP4F11Q9HBI6 524 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 PARD6AQ9NPB6 346 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 FAM49BQ9NUQ9 324 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 ABI2Q9NYB9 513 aaPredicted RBP12.52□□□□□ -0.41
LTBR-214ENST00000545445 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.52□□□□□ -0.41
LTBR-214ENST00000545445 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.52□□□□□ -0.41
LTBR-214ENST00000545445 CEP83Q9Y592 693 aa12.52□□□□□ -0.41
LTBR-214ENST00000545445 TRIM66O15016 1216 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 MFAP3LO75121 409 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 PNMA6AP0CW24 399 aaPredicted RBP12.51□□□□□ -0.41
LTBR-214ENST00000545445 SETSIPP0DME0 302 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 HAPLN1P10915 354 aaPredicted RBP12.51□□□□□ -0.41
LTBR-214ENST00000545445 CCDC130P13994 396 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 CD72P21854 359 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 TGM1P22735 817 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 BDNFP23560 247 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 BRD2P25440 801 aaKnown RBP12.51□□□□□ -0.41
LTBR-214ENST00000545445 ALDH1A3P47895 512 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 BCAT1P54687 386 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 DUSP4Q13115 394 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 MLF2Q15773 248 aaPredicted RBP12.51□□□□□ -0.41
LTBR-214ENST00000545445 MGAT5BQ3V5L5 792 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 PPP1R26Q5T8A7 1209 aaPredicted RBP12.51□□□□□ -0.41
LTBR-214ENST00000545445 PAQR9Q6ZVX9 377 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 IRF2BP2Q7Z5L9 587 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 FAM35AQ86V20 835 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 ZBTB44Q8NCP5 570 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 EPS8L1Q8TE68 723 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 TFAP2BQ92481 460 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 C8orf48Q96LL4 319 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 PGLYRP2Q96PD5 576 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 DNAJC7Q99615 494 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 DDX23Q9BUQ8 820 aaKnown RBP12.51□□□□□ -0.41
LTBR-214ENST00000545445 DUSP16Q9BY84 665 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 UBXN6Q9BZV1 441 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 LHX5Q9H2C1 402 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 CSNK1G1Q9HCP0 422 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 PNPLA8Q9NP80 782 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 DMAP1Q9NPF5 467 aaPredicted RBP12.51□□□□□ -0.41
LTBR-214ENST00000545445 ZSCAN32Q9NX65 697 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 ZDHHC7Q9NXF8 308 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 TSPAN16Q9UKR8 245 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 PCDHGC3Q9UN70 934 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 CACNA1IQ9P0X4 2223 aa12.51□□□□□ -0.41
LTBR-214ENST00000545445 FAM170BA6NMN3 283 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 AP1G2O75843 785 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 VNN2O95498 520 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 LSM8O95777 96 aaKnown RBP12.5□□□□□ -0.41
LTBR-214ENST00000545445 SERPING1P05155 500 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 C8AP07357 584 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 POU2F2P09086 479 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 HNRNPA1P09651 372 aaKnown RBP eCLIP12.5□□□□□ -0.41
LTBR-214ENST00000545445 FSHRP23945 695 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 CYP2F1P24903 491 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 ANXA13P27216 316 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 ADORA2BP29275 332 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 GRIK1P39086 918 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 GSDMDP57764 484 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 NTHL1P78549 312 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 CDR2Q01850 454 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 ARID5AQ03989 594 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 KLHL30Q0D2K2 578 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 BST2Q10589 180 aaKnown RBP12.5□□□□□ -0.41
LTBR-214ENST00000545445 GOLGA7BQ2TAP0 167 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 PPM1JQ5JR12 505 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 TRIM72Q6ZMU5 477 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 VPS36Q86VN1 386 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 DDX1Q92499 740 aaKnown RBP12.5□□□□□ -0.41
LTBR-214ENST00000545445 SPATA17Q96L03 361 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 PRKD2Q9BZL6 878 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 ZNF518BQ9C0D4 1074 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 PDCL3Q9H2J4 239 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 LTB4R2Q9NPC1 389 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 KRT82Q9NSB4 513 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 ABHD10Q9NUJ1 306 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 EHD2Q9NZN4 543 aa12.5□□□□□ -0.41
LTBR-214ENST00000545445 NOCTQ9UK39 431 aaKnown RBP12.5□□□□□ -0.41
LTBR-214ENST00000545445 ASB3Q9Y575 518 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms