RNA–Protein interactions for RNA: ENST00000545038.5

DDX47-212, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 2,357 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-212ENST00000545038 TMEM259Q4ZIN3 620 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 TFDP3Q5H9I0 405 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 OGFRL1Q5TC84 451 aaPredicted RBP8.25□□□□□ -1.09
DDX47-212ENST00000545038 C6orf163Q5TEZ5 329 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 APOBEC3HQ6NTF7 200 aaKnown RBP8.25□□□□□ -1.09
DDX47-212ENST00000545038 KBTBD6Q86V97 674 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 PHF13Q86YI8 300 aaPredicted RBP8.25□□□□□ -1.09
DDX47-212ENST00000545038 MARVELD2Q8N4S9 558 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 ARFGAP1Q8N6T3 406 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 TMEM161BQ8NDZ6 487 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.25□□□□□ -1.09
DDX47-212ENST00000545038 FBXL18Q96ME1 805 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 SLC13A1Q9BZW2 595 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 WWP1Q9H0M0 922 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 CYP4F11Q9HBI6 524 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 APOBEC3GQ9HC16 384 aaKnown RBP8.25□□□□□ -1.09
DDX47-212ENST00000545038 NYAP2Q9P242 653 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 XPO7Q9UIA9 1087 aaKnown RBP8.25□□□□□ -1.09
DDX47-212ENST00000545038 PRR12Q9ULL5 1215 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 TDRKHQ9Y2W6 561 aaKnown RBP8.25□□□□□ -1.09
DDX47-212ENST00000545038 AFG3L2Q9Y4W6 797 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 TEX264Q9Y6I9 313 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 ZNF335Q9H4Z2 1342 aaPredicted RBP8.25□□□□□ -1.09
DDX47-212ENST00000545038 COPEO14579 308 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 DHX15O43143 795 aaKnown RBP8.25□□□□□ -1.09
DDX47-212ENST00000545038 MAPTP10636 758 aaKnown RBP8.25□□□□□ -1.09
DDX47-212ENST00000545038 IL1R2P27930 398 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 NCKAP1LP55160 1127 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 ADARP55265 1226 aaKnown RBP8.25□□□□□ -1.09
DDX47-212ENST00000545038 GRAMD1BQ3KR37 738 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 KCNT1Q5JUK3 1230 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 KLHL35Q6PF15 583 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 CCDC174Q6PII3 467 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 KIAA0319LQ8IZA0 1049 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 ABRAQ8N0Z2 381 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 BSNDQ8WZ55 320 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 MCEEQ96PE7 176 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 SENP7Q9BQF6 1050 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 LIN28AQ9H9Z2 209 aaKnown RBP8.25□□□□□ -1.09
DDX47-212ENST00000545038 APPL1Q9UKG1 709 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 ZBTB21Q9ULJ3 1066 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 TBX20Q9UMR3 447 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 TTLL3Q9Y4R7 772 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 TELO2Q9Y4R8 837 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 QSER1Q2KHR3 1735 aa8.25□□□□□ -1.09
DDX47-212ENST00000545038 RGPD3A6NKT7 1758 aaPredicted RBP8.24□□□□□ -1.09
DDX47-212ENST00000545038 RGPD4Q7Z3J3 1758 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 LTBP1Q14766 1721 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 CROCCQ5TZA2 2017 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 IQANK1A0A1B0GTG1 560 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 H3BSA7 217 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 BOLA2-SMG1P6H3BVE0 249 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 DENRO43583 198 aaKnown RBP8.24□□□□□ -1.09
DDX47-212ENST00000545038 VNN1O95497 513 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 ITGAXP20702 1163 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 L1CAMP32004 1257 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 APOFQ13790 326 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 TATDN1Q6P1N9 297 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 KLC3Q6P597 504 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 FRMD7Q6ZUT3 714 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 TRIM42Q8IWZ5 723 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 SLF2Q8IX21 1173 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 FAM71DQ8N9W8 422 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 TTC13Q8NBP0 860 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 TFB1MQ8WVM0 346 aaKnown RBP8.24□□□□□ -1.09
DDX47-212ENST00000545038 IRGQQ8WZA9 623 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 TRIM11Q96F44 468 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 DCUN1D1Q96GG9 259 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 RILPQ96NA2 401 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 CATSPER2Q96P56 530 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 SLX1AQ9BQ83 275 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 ST6GALNAC4Q9H4F1 302 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 MRPL47Q9HD33 250 aaKnown RBP8.24□□□□□ -1.09
DDX47-212ENST00000545038 INIPQ9NRY2 104 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 ARHGEF38Q9NXL2 777 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 GGA1Q9UJY5 639 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 CNTNAP4Q9C0A0 1308 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 TMEM221A6NGB7 291 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 CCDC160A6NGH7 325 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 CST8O60676 142 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 SIN3BO75182 1162 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 FBXO21O94952 628 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 CRTAMO95727 393 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 INHBAP08476 426 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 VIL1P09327 827 aaKnown RBP8.24□□□□□ -1.09
DDX47-212ENST00000545038 WEE2P0C1S8 567 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 MMP8P22894 467 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 ALDH1B1P30837 517 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 PTPN7P35236 360 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 SERPINB6P35237 376 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 ECE1P42892 770 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 BASP1P80723 227 aaKnown RBP8.24□□□□□ -1.09
DDX47-212ENST00000545038 XIAPP98170 497 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 CDKL1Q00532 357 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 TMED1Q13445 227 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 VWA5B1Q5TIE3 1220 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 TDRD10Q5VZ19 366 aaKnown RBP8.24□□□□□ -1.09
DDX47-212ENST00000545038 TMEM270Q6UE05 265 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 ZNF677Q86XU0 584 aa8.24□□□□□ -1.09
DDX47-212ENST00000545038 MAP4K3Q8IVH8 894 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms