RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 CSH1P0DML2 217 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 CSH2P0DML3 217 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 ARSAP15289 507 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 CYP2F1P24903 491 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 DDX6P26196 483 aaKnown RBP eCLIP13.25□□□□□ -0.29
ACTN1-206ENST00000544964 HOXA6P31267 233 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 AVPR1AP37288 418 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 ATXN1P54253 815 aaKnown RBP13.25□□□□□ -0.29
ACTN1-206ENST00000544964 TAF12Q16514 161 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 NFE2Q16621 373 aaPredicted RBP13.25□□□□□ -0.29
ACTN1-206ENST00000544964 DDR2Q16832 855 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 SOWAHAQ2M3V2 549 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 CFAP221Q4G0U5 840 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 ZNF667Q5HYK9 610 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 NAIF1Q69YI7 327 aaPredicted RBP13.25□□□□□ -0.29
ACTN1-206ENST00000544964 FSTL4Q6MZW2 842 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 SCARA5Q6ZMJ2 495 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 PRR23BQ6ZRT6 265 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 LIMS2Q7Z4I7 341 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 LONP2Q86WA8 852 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 ADGRF2Q8IZF7 708 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 TMEM86AQ8N2M4 240 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 SYNPOQ8N3V7 929 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 CCDC150Q8NCX0 1101 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 EHBP1Q8NDI1 1231 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 SPATA18Q8TC71 538 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 TATDN2Q93075 761 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 TRMT2BQ96GJ1 504 aaKnown RBP13.25□□□□□ -0.29
ACTN1-206ENST00000544964 MMS19Q96T76 1030 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 IMPG2Q9BZV3 1241 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 RBSNQ9H1K0 784 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 EBF3Q9H4W6 596 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 KIF9Q9HAQ2 790 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 GKN1Q9NS71 199 aa13.25□□□□□ -0.29
ACTN1-206ENST00000544964 USP24Q9UPU5 2620 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 PRR5-ARHGAP8B1AHC4 643 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 PMM2O15305 246 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 P4HA2O15460 535 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 HUS1O60921 280 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 SLC9A1P19634 815 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 RAP1GAPP47736 663 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 TNNC1P63316 161 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 NOP14P78316 857 aaKnown RBP13.24□□□□□ -0.29
ACTN1-206ENST00000544964 ARHGAP8P85298 464 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 CETN1Q12798 172 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 USP4Q13107 963 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 SIM2Q14190 667 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-206ENST00000544964 ZNF268Q14587 947 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-206ENST00000544964 TMEM196Q5HYL7 178 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 HEATR6Q6AI08 1181 aaKnown RBP13.24□□□□□ -0.29
ACTN1-206ENST00000544964 MON1AQ86VX9 555 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 TOP6BLQ8N6T0 577 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 LMO3Q8TAP4 145 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 KBTBD7Q8WVZ9 684 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 MRPS31Q92665 395 aaKnown RBP13.24□□□□□ -0.29
ACTN1-206ENST00000544964 TAF4BQ92750 862 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 MYRFLQ96LU7 910 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 SLC22A12Q96S37 553 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 ANP32EQ9BTT0 268 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 INTS2Q9H0H0 1204 aaKnown RBP13.24□□□□□ -0.29
ACTN1-206ENST00000544964 SDCBP2Q9H190 292 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 SMYD3Q9H7B4 428 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 VRTNQ9H8Y1 702 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 TDP1Q9NUW8 608 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 THG1LQ9NWX6 298 aaKnown RBP13.24□□□□□ -0.29
ACTN1-206ENST00000544964 GCNT4Q9P109 453 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 GTF3C4Q9UKN8 822 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 CDV3Q9UKY7 258 aaKnown RBP13.24□□□□□ -0.29
ACTN1-206ENST00000544964 RAB23Q9ULC3 237 aa13.24□□□□□ -0.29
ACTN1-206ENST00000544964 MAGED2Q9UNF1 606 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-206ENST00000544964 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.24□□□□□ -0.29
ACTN1-206ENST00000544964 LRRC10BA6NIK2 292 aa13.23□□□□□ -0.29
ACTN1-206ENST00000544964 SOBPA7XYQ1 873 aa13.23□□□□□ -0.29
ACTN1-206ENST00000544964 TRDMT1O14717 391 aaKnown RBP13.23□□□□□ -0.29
ACTN1-206ENST00000544964 LRP3O75074 770 aa13.23□□□□□ -0.29
ACTN1-206ENST00000544964 SERPINC1P01008 464 aa13.23□□□□□ -0.29
ACTN1-206ENST00000544964 CNR2P34972 360 aa13.23□□□□□ -0.29
ACTN1-206ENST00000544964 ASPAP45381 313 aa13.23□□□□□ -0.29
ACTN1-206ENST00000544964 CDH8P55286 799 aa13.23□□□□□ -0.29
ACTN1-206ENST00000544964 FANCCQ00597 558 aa13.23□□□□□ -0.29
ACTN1-206ENST00000544964 APBA1Q02410 837 aa13.23□□□□□ -0.29
ACTN1-206ENST00000544964 KCNMA1Q12791 1236 aa13.23□□□□□ -0.29
ACTN1-206ENST00000544964 RUNX3Q13761 415 aa13.23□□□□□ -0.29
ACTN1-206ENST00000544964 ZNF77Q15935 545 aa13.23□□□□□ -0.29
ACTN1-206ENST00000544964 FAM171BQ6P995 826 aa13.23□□□□□ -0.29
ACTN1-206ENST00000544964 GBP6Q6ZN66 633 aa13.23□□□□□ -0.29
ACTN1-206ENST00000544964 WDR5BQ86VZ2 330 aa13.23□□□□□ -0.29
ACTN1-206ENST00000544964 FUBP3Q96I24 572 aaKnown RBP eCLIP13.23□□□□□ -0.29
ACTN1-206ENST00000544964 MRPL45Q9BRJ2 306 aaKnown RBP13.23□□□□□ -0.29
ACTN1-206ENST00000544964 FBRSL1Q9HCM7 1045 aaKnown RBP13.23□□□□□ -0.29
ACTN1-206ENST00000544964 UXTQ9UBK9 157 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-206ENST00000544964 NME7Q9Y5B8 376 aa13.23□□□□□ -0.29
ACTN1-206ENST00000544964 LGALS16A8MUM7 142 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 TEX33O43247 280 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 ATP2C2O75185 946 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 EGFP01133 1207 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 SDHBP21912 280 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 PON1P27169 355 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 PCSK1P29120 753 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 MAGEA11P43364 429 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms