RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 PPP3CCP48454 512 aa16.5■□□□□ 0.23
CD4-212ENST00000544344 CYP27A1Q02318 531 aa16.5■□□□□ 0.23
CD4-212ENST00000544344 GFPT1Q06210 699 aaPredicted RBP16.5■□□□□ 0.23
CD4-212ENST00000544344 TAF10Q12962 218 aa16.5■□□□□ 0.23
CD4-212ENST00000544344 BYSLQ13895 437 aaKnown RBP16.5■□□□□ 0.23
CD4-212ENST00000544344 MAPRE1Q15691 268 aaKnown RBP16.5■□□□□ 0.23
CD4-212ENST00000544344 MIB1Q86YT6 1006 aa16.5■□□□□ 0.23
CD4-212ENST00000544344 SLC41A1Q8IVJ1 513 aa16.5■□□□□ 0.23
CD4-212ENST00000544344 PGBD3Q8N328 593 aa16.5■□□□□ 0.23
CD4-212ENST00000544344 HDDC3Q8N4P3 179 aa16.5■□□□□ 0.23
CD4-212ENST00000544344 MINDY1Q8N5J2 469 aa16.5■□□□□ 0.23
CD4-212ENST00000544344 CEP76Q8TAP6 659 aa16.5■□□□□ 0.23
CD4-212ENST00000544344 PCIF1Q9H4Z3 704 aa16.5■□□□□ 0.23
CD4-212ENST00000544344 OLFML3Q9NRN5 406 aa16.5■□□□□ 0.23
CD4-212ENST00000544344 CALCOCO1Q9P1Z2 691 aa16.5■□□□□ 0.23
CD4-212ENST00000544344 GPSM3Q9Y4H4 160 aa16.5■□□□□ 0.23
CD4-212ENST00000544344 CELSR3Q9NYQ7 3312 aa16.49■□□□□ 0.23
CD4-212ENST00000544344 GCN1Q92616 2671 aaKnown RBP16.49■□□□□ 0.23
CD4-212ENST00000544344 A0A1W2PQF6 199 aa16.49■□□□□ 0.23
CD4-212ENST00000544344 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.49■□□□□ 0.23
CD4-212ENST00000544344 H3BQV1 296 aa16.49■□□□□ 0.23
CD4-212ENST00000544344 TRIM66O15016 1216 aa16.49■□□□□ 0.23
CD4-212ENST00000544344 OPHN1O60890 802 aa16.49■□□□□ 0.23
CD4-212ENST00000544344 GJB3O75712 270 aa16.49■□□□□ 0.23
CD4-212ENST00000544344 GCNT3O95395 438 aa16.49■□□□□ 0.23
CD4-212ENST00000544344 GAP43P17677 238 aa16.49■□□□□ 0.23
CD4-212ENST00000544344 ANXA13P27216 316 aa16.49■□□□□ 0.23
CD4-212ENST00000544344 RPL6Q02878 288 aaKnown RBP16.49■□□□□ 0.23
CD4-212ENST00000544344 ZNF33AQ06730 810 aa16.49■□□□□ 0.23
CD4-212ENST00000544344 MYO1EQ12965 1108 aa16.49■□□□□ 0.23
CD4-212ENST00000544344 SF3A1Q15459 793 aaKnown RBP16.49■□□□□ 0.23
CD4-212ENST00000544344 CAMK1GQ96NX5 476 aa16.49■□□□□ 0.23
CD4-212ENST00000544344 MRPL45Q9BRJ2 306 aaKnown RBP16.49■□□□□ 0.23
CD4-212ENST00000544344 DNAAF2Q9NVR5 837 aaKnown RBP16.49■□□□□ 0.23
CD4-212ENST00000544344 EHD2Q9NZN4 543 aa16.49■□□□□ 0.23
CD4-212ENST00000544344 STK17AQ9UEE5 414 aa16.49■□□□□ 0.23
CD4-212ENST00000544344 IGHV1OR15-9A0A0B4J2B8 117 aa16.48■□□□□ 0.23
CD4-212ENST00000544344 E2F8A0AVK6 867 aa16.48■□□□□ 0.23
CD4-212ENST00000544344 FRMD3A2A2Y4 597 aa16.48■□□□□ 0.23
CD4-212ENST00000544344 ARHGAP33O14559 1287 aa16.48■□□□□ 0.23
CD4-212ENST00000544344 TRIM24O15164 1050 aa16.48■□□□□ 0.23
CD4-212ENST00000544344 TULP3O75386 442 aa16.48■□□□□ 0.23
CD4-212ENST00000544344 BMP15O95972 392 aa16.48■□□□□ 0.23
CD4-212ENST00000544344 ABL1P00519 1130 aa16.48■□□□□ 0.23
CD4-212ENST00000544344 MBL2P11226 248 aaPredicted RBP16.48■□□□□ 0.23
CD4-212ENST00000544344 ATXN3P54252 364 aaPredicted RBP16.48■□□□□ 0.23
CD4-212ENST00000544344 ZNF423Q2M1K9 1284 aa16.48■□□□□ 0.23
CD4-212ENST00000544344 MDH1BQ5I0G3 518 aa16.48■□□□□ 0.23
CD4-212ENST00000544344 GPD1LQ8N335 351 aa16.48■□□□□ 0.23
CD4-212ENST00000544344 ZNF513Q8N8E2 541 aaPredicted RBP16.48■□□□□ 0.23
CD4-212ENST00000544344 NAT16Q8N8M0 369 aa16.48■□□□□ 0.23
CD4-212ENST00000544344 KCNV2Q8TDN2 545 aa16.48■□□□□ 0.23
CD4-212ENST00000544344 WBP2Q969T9 261 aa16.48■□□□□ 0.23
CD4-212ENST00000544344 TMX3Q96JJ7 454 aa16.48■□□□□ 0.23
CD4-212ENST00000544344 TBC1D14Q9P2M4 693 aa16.48■□□□□ 0.23
CD4-212ENST00000544344 PCDHB13Q9Y5F0 798 aa16.48■□□□□ 0.23
CD4-212ENST00000544344 TBC1D3BA6NDS4 549 aa16.47■□□□□ 0.23
CD4-212ENST00000544344 HOXC11O43248 304 aaPredicted RBP16.47■□□□□ 0.23
CD4-212ENST00000544344 COCHO43405 550 aa16.47■□□□□ 0.23
CD4-212ENST00000544344 GAD2Q05329 585 aa16.47■□□□□ 0.23
CD4-212ENST00000544344 SCAPQ12770 1279 aa16.47■□□□□ 0.23
CD4-212ENST00000544344 SOWAHCQ53LP3 525 aaPredicted RBP16.47■□□□□ 0.23
CD4-212ENST00000544344 TDRD10Q5VZ19 366 aaKnown RBP16.47■□□□□ 0.23
CD4-212ENST00000544344 SLC36A4Q6YBV0 504 aa16.47■□□□□ 0.23
CD4-212ENST00000544344 DDX42Q86XP3 938 aaKnown RBP eCLIP16.47■□□□□ 0.23
CD4-212ENST00000544344 CBWD2Q8IUF1 395 aa16.47■□□□□ 0.23
CD4-212ENST00000544344 SYCP3Q8IZU3 236 aa16.47■□□□□ 0.23
CD4-212ENST00000544344 NOC3LQ8WTT2 800 aaKnown RBP16.47■□□□□ 0.23
CD4-212ENST00000544344 ANKRD36BP1Q96IX9 119 aa16.47■□□□□ 0.23
CD4-212ENST00000544344 SLITRK1Q96PX8 696 aa16.47■□□□□ 0.23
CD4-212ENST00000544344 DUSP9Q99956 384 aaKnown RBP16.47■□□□□ 0.23
CD4-212ENST00000544344 ZNF518BQ9C0D4 1074 aa16.47■□□□□ 0.23
CD4-212ENST00000544344 DPEP3Q9H4B8 488 aa16.47■□□□□ 0.23
CD4-212ENST00000544344 STARD13Q9Y3M8 1113 aa16.47■□□□□ 0.23
CD4-212ENST00000544344 APC2O95996 2303 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 SH3BP5O60239 455 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 TACC1O75410 805 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 PRPF6O94906 941 aaKnown RBP16.46■□□□□ 0.23
CD4-212ENST00000544344 CD2BP2O95400 341 aaKnown RBP16.46■□□□□ 0.23
CD4-212ENST00000544344 CST3P01034 146 aaPredicted RBP16.46■□□□□ 0.23
CD4-212ENST00000544344 HOXB2P14652 356 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 WASP42768 502 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 HNRNPDQ14103 355 aaKnown RBP16.46■□□□□ 0.23
CD4-212ENST00000544344 C10orf76Q5T2E6 689 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 C19orf48Q6RUI8 117 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 HS2ST1Q7LGA3 356 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 RABEPKQ7Z6M1 372 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 TMEM25Q86YD3 366 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 BBS7Q8IWZ6 715 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 TERB1Q8NA31 727 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 ADAMTS14Q8WXS8 1223 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 OTUB2Q96DC9 234 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 MMS19Q96T76 1030 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 ACOX2Q99424 681 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 B3GNT5Q9BYG0 378 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 CD93Q9NPY3 652 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 DEC1Q9P2X7 70 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 SMG1Q96Q15 3661 aaKnown RBP16.46■□□□□ 0.23
CD4-212ENST00000544344 ACACAQ13085 2346 aa16.46■□□□□ 0.23
CD4-212ENST00000544344 PTPRBP23467 1997 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms