RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 DNAJB4Q9UDY4 337 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 EFR3BQ9Y2G0 817 aa20.78■□□□□ 0.92
COPS7A-218ENST00000543939 MICAL3Q7RTP6 2002 aa20.77■□□□□ 0.92
COPS7A-218ENST00000543939 FAM153BP0C7A2 387 aa20.77■□□□□ 0.92
COPS7A-218ENST00000543939 OR1G1P47890 313 aa20.77■□□□□ 0.92
COPS7A-218ENST00000543939 CDR1P51861 262 aa20.77■□□□□ 0.92
COPS7A-218ENST00000543939 DRG2P55039 364 aaKnown RBP20.77■□□□□ 0.92
COPS7A-218ENST00000543939 ATP11AP98196 1134 aa20.77■□□□□ 0.92
COPS7A-218ENST00000543939 CDO1Q16878 200 aa20.77■□□□□ 0.92
COPS7A-218ENST00000543939 FAM153CQ494X1 144 aa20.77■□□□□ 0.92
COPS7A-218ENST00000543939 KAZNQ674X7 775 aa20.77■□□□□ 0.92
COPS7A-218ENST00000543939 THEM5Q8N1Q8 247 aa20.77■□□□□ 0.92
COPS7A-218ENST00000543939 OR10T2Q8NGX3 314 aa20.77■□□□□ 0.92
COPS7A-218ENST00000543939 SMARCD1Q96GM5 515 aa20.77■□□□□ 0.92
COPS7A-218ENST00000543939 FAM193BQ96PV7 902 aaPredicted RBP20.77■□□□□ 0.92
COPS7A-218ENST00000543939 NCAPGQ9BPX3 1015 aa20.77■□□□□ 0.92
COPS7A-218ENST00000543939 UBXN6Q9BZV1 441 aa20.77■□□□□ 0.92
COPS7A-218ENST00000543939 VIPAS39Q9H9C1 493 aa20.77■□□□□ 0.92
COPS7A-218ENST00000543939 LRRC4Q9HBW1 653 aa20.77■□□□□ 0.92
COPS7A-218ENST00000543939 TMEM30AQ9NV96 361 aa20.77■□□□□ 0.92
COPS7A-218ENST00000543939 FAM153AQ9UHL3 310 aa20.77■□□□□ 0.92
COPS7A-218ENST00000543939 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.76■□□□□ 0.91
COPS7A-218ENST00000543939 CACNA2D1P54289 1103 aa20.76■□□□□ 0.91
COPS7A-218ENST00000543939 CCL23P55773 120 aa20.76■□□□□ 0.91
COPS7A-218ENST00000543939 MRPS5P82675 430 aaKnown RBP20.76■□□□□ 0.91
COPS7A-218ENST00000543939 SNX1Q13596 522 aa20.76■□□□□ 0.91
COPS7A-218ENST00000543939 HLTFQ14527 1009 aaKnown RBP eCLIP20.76■□□□□ 0.91
COPS7A-218ENST00000543939 CTU1Q7Z7A3 348 aaKnown RBP20.76■□□□□ 0.91
COPS7A-218ENST00000543939 ABI1Q8IZP0 508 aa20.76■□□□□ 0.91
COPS7A-218ENST00000543939 FAM172AQ8WUF8 416 aa20.76■□□□□ 0.91
COPS7A-218ENST00000543939 CENPIQ92674 756 aaPredicted RBP20.76■□□□□ 0.91
COPS7A-218ENST00000543939 DDX23Q9BUQ8 820 aaKnown RBP20.76■□□□□ 0.91
COPS7A-218ENST00000543939 DPH5Q9H2P9 285 aa20.76■□□□□ 0.91
COPS7A-218ENST00000543939 CSNK1G1Q9HCP0 422 aa20.76■□□□□ 0.91
COPS7A-218ENST00000543939 FNDC1Q4ZHG4 1894 aaPredicted RBP20.76■□□□□ 0.91
COPS7A-218ENST00000543939 PRPSAP2O60256 369 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 HSF2BPO75031 334 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 ECEL1O95672 775 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 DESP17661 470 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 RAB41Q5JT25 222 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 LRRTM3Q86VH5 581 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 TMEM209Q96SK2 561 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 KCNK16Q96T55 309 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 PPP1R12CQ9BZL4 782 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 TRIM31Q9BZY9 425 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 NEUROG2Q9H2A3 272 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 NRDE2Q9H7Z3 1164 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 NGRNQ9NPE2 291 aaKnown RBP20.75■□□□□ 0.91
COPS7A-218ENST00000543939 TMLHEQ9NVH6 421 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 LRFN2Q9ULH4 789 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 SPDYE4A6NLX3 237 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 HHLA1C9JL84 531 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 ENDOD1O94919 500 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 TFE3P19532 575 aaPredicted RBP20.75■□□□□ 0.91
COPS7A-218ENST00000543939 CYP2C18P33260 490 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 NDUFV1P49821 464 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 GATMP50440 423 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 ARSEP51690 589 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 TKTL1P51854 596 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 HDAC4P56524 1084 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 FBXO46Q6PJ61 603 aaPredicted RBP20.75■□□□□ 0.91
COPS7A-218ENST00000543939 SIX6OS1Q8N1H7 587 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 KCTD6Q8NC69 237 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 ATL2Q8NHH9 583 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 DIS3LQ8TF46 1054 aaKnown RBP20.75■□□□□ 0.91
COPS7A-218ENST00000543939 NDRG1Q92597 394 aaKnown RBP20.75■□□□□ 0.91
COPS7A-218ENST00000543939 HSPH1Q92598 858 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.75■□□□□ 0.91
COPS7A-218ENST00000543939 HPCAL4Q9UM19 191 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 PRG3Q9Y2Y8 225 aaPredicted RBP20.75■□□□□ 0.91
COPS7A-218ENST00000543939 VWA8A3KMH1 1905 aa20.75■□□□□ 0.91
COPS7A-218ENST00000543939 PATJQ8NI35 1801 aa20.74■□□□□ 0.91
COPS7A-218ENST00000543939 HOXA2O43364 376 aa20.74■□□□□ 0.91
COPS7A-218ENST00000543939 DAB1O75553 588 aa20.74■□□□□ 0.91
COPS7A-218ENST00000543939 FBXO21O94952 628 aa20.74■□□□□ 0.91
COPS7A-218ENST00000543939 CD48P09326 243 aa20.74■□□□□ 0.91
COPS7A-218ENST00000543939 MATKP42679 507 aa20.74■□□□□ 0.91
COPS7A-218ENST00000543939 YWHAHQ04917 246 aaPredicted RBP20.74■□□□□ 0.91
COPS7A-218ENST00000543939 MAPRE1Q15691 268 aaKnown RBP20.74■□□□□ 0.91
COPS7A-218ENST00000543939 BOLA3Q53S33 107 aa20.74■□□□□ 0.91
COPS7A-218ENST00000543939 GRK7Q8WTQ7 553 aa20.74■□□□□ 0.91
COPS7A-218ENST00000543939 TEKT4Q8WW24 435 aa20.74■□□□□ 0.91
COPS7A-218ENST00000543939 ARMC5Q96C12 935 aa20.74■□□□□ 0.91
COPS7A-218ENST00000543939 RHOBTB2Q9BYZ6 727 aa20.74■□□□□ 0.91
COPS7A-218ENST00000543939 ADAM33Q9BZ11 813 aa20.74■□□□□ 0.91
COPS7A-218ENST00000543939 FEZ2Q9UHY8 353 aaPredicted RBP20.74■□□□□ 0.91
COPS7A-218ENST00000543939 TBX21Q9UL17 535 aa20.74■□□□□ 0.91
COPS7A-218ENST00000543939 OAZ2O95190 189 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 RABGGTBP53611 331 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 TSPY1Q01534 308 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 DRICH1Q6PGQ1 229 aaPredicted RBP20.73■□□□□ 0.91
COPS7A-218ENST00000543939 SYDE1Q6ZW31 735 aaPredicted RBP20.73■□□□□ 0.91
COPS7A-218ENST00000543939 GPRIN1Q7Z2K8 1008 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 NPAS4Q8IUM7 802 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 DEFB106AQ8N104 65 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 KRT222Q8N1A0 295 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 TBCBQ99426 244 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 FAM118BQ9BPY3 351 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 ULBP1Q9BZM6 244 aa20.73■□□□□ 0.91
COPS7A-218ENST00000543939 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms