RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 SHROOM1Q2M3G4 852 aaPredicted RBP13.17□□□□□ -0.3
SMG8-202ENST00000543872 SLC9A9Q8IVB4 645 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 PPIL6Q8IXY8 311 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 ZFRQ96KR1 1074 aaKnown RBP13.17□□□□□ -0.3
SMG8-202ENST00000543872 SLITRK1Q96PX8 696 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 BTBD9Q96Q07 612 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 MRPS26Q9BYN8 205 aaKnown RBP13.17□□□□□ -0.3
SMG8-202ENST00000543872 AGTPBP1Q9UPW5 1226 aa13.17□□□□□ -0.3
SMG8-202ENST00000543872 APOBEC2Q9Y235 224 aaKnown RBP13.17□□□□□ -0.3
SMG8-202ENST00000543872 TCRBV9S1A1TA0A576 114 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 KBTBD13C9JR72 458 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 SLC16A4O15374 487 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 AVILO75366 819 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 TNFAIP8O95379 198 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 AP3B2Q13367 1082 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 FAM91A1Q658Y4 838 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 OTOP1Q7RTM1 612 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 POLNQ7Z5Q5 900 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 ZNF410Q86VK4 478 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 RCOR2Q8IZ40 523 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 DAW1Q8N136 415 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 DEPTORQ8TB45 409 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 ACCSQ96QU6 501 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 DCUN1D5Q9BTE7 237 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 RBM38Q9H0Z9 239 aaKnown RBP13.16□□□□□ -0.3
SMG8-202ENST00000543872 CNTN3Q9P232 1028 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 HBS1LQ9Y450 684 aaKnown RBP13.16□□□□□ -0.3
SMG8-202ENST00000543872 COL5A2P05997 1499 aaPredicted RBP13.16□□□□□ -0.3
SMG8-202ENST00000543872 LOC102724428A0A0B4J2F2 783 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 BTBD19C9JJ37 291 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 F8VP50 259 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 ADCY6O43306 1168 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 XPOTO43592 962 aaKnown RBP13.16□□□□□ -0.3
SMG8-202ENST00000543872 TMEM63AO94886 807 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 SIK1P57059 783 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 RHBDL3P58872 404 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 XIAPP98170 497 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 MAMLD1Q13495 774 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 ITGA7Q13683 1181 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 ITPRIPL1Q6GPH6 555 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 PADI6Q6TGC4 694 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 SPOCD1Q6ZMY3 1216 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 CLIP3Q96DZ5 547 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 MAML3Q96JK9 1138 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 CCT7Q99832 543 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 PCDH9Q9HC56 1237 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 AVENQ9NQS1 362 aaPredicted RBP13.16□□□□□ -0.3
SMG8-202ENST00000543872 RRN3Q9NYV6 651 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 POLIQ9UNA4 740 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 DNAJC16Q9Y2G8 782 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 CFBP00751 764 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 FAM58BPP0C7Q3 252 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 RPL22P35268 128 aaKnown RBP13.16□□□□□ -0.3
SMG8-202ENST00000543872 PSMC5P62195 406 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 SNRNP35Q16560 246 aaKnown RBP13.16□□□□□ -0.3
SMG8-202ENST00000543872 ANKDD1AQ495B1 522 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 MFSD14BQ5SR56 506 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 MARVELD2Q8N4S9 558 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 FBXL13Q8NEE6 735 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 COPS7BQ9H9Q2 264 aaPredicted RBP13.16□□□□□ -0.3
SMG8-202ENST00000543872 FAIMQ9NVQ4 179 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 GNEQ9Y223 722 aaKnown RBP13.16□□□□□ -0.3
SMG8-202ENST00000543872 SNCAIPQ9Y6H5 919 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 PAPPAQ13219 1627 aa13.16□□□□□ -0.3
SMG8-202ENST00000543872 RBP3P10745 1247 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 PIM1P11309 404 aaPredicted RBP13.15□□□□□ -0.3
SMG8-202ENST00000543872 CDH2P19022 906 aaPredicted RBP13.15□□□□□ -0.3
SMG8-202ENST00000543872 HSPA1LP34931 641 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 MRPS22P82650 360 aaKnown RBP13.15□□□□□ -0.3
SMG8-202ENST00000543872 SLFN13Q68D06 897 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 LPCAT2Q7L5N7 544 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 FBXO11Q86XK2 927 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 RTKN2Q8IZC4 609 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 PQLC1Q8N2U9 271 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 RNF148Q8N7C7 305 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 ACTL9Q8TC94 416 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 TEKT1Q969V4 418 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 C7orf26Q96N11 449 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 DHRS4Q9BTZ2 278 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 AMNQ9BXJ7 453 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 CLEC11AQ9Y240 323 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 MYPNQ86TC9 1320 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 CCNT2O60583 730 aaKnown RBP13.15□□□□□ -0.3
SMG8-202ENST00000543872 HALP42357 657 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 OTUD4Q01804 1114 aaKnown RBP13.15□□□□□ -0.3
SMG8-202ENST00000543872 SLC18A2Q05940 514 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 NFIXQ14938 502 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 CCDC142Q17RM4 750 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 SMTNL2Q2TAL5 461 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 SMUG1Q53HV7 270 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 VWA5B1Q5TIE3 1220 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 MOXD1Q6UVY6 613 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 ZBTB46Q86UZ6 589 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 WDR75Q8IWA0 830 aaKnown RBP13.15□□□□□ -0.3
SMG8-202ENST00000543872 FAM71DQ8N9W8 422 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 PPP4R1Q8TF05 950 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 PPP1R14BQ96C90 147 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 LXNQ9BS40 222 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 C1orf21Q9H246 121 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 TMEM206Q9H813 350 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms