RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 GOLGA5Q8TBA6 731 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 OTUB2Q96DC9 234 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 ZNF518BQ9C0D4 1074 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 SLC39A2Q9NP94 309 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 TMEM30AQ9NV96 361 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 COMMD8Q9NX08 183 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 SMPD4Q9NXE4 827 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 CFAP97Q9P2B7 532 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 NXF1Q9UBU9 619 aaKnown RBP12.6□□□□□ -0.39
PTPN6-219ENST00000542848 ATP8B3O60423 1300 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.59□□□□□ -0.39
PTPN6-219ENST00000542848 CLDN5O00501 218 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 EXOC3O60645 756 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 KAT7O95251 611 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 HSP90AA1P07900 732 aaKnown RBP12.59□□□□□ -0.39
PTPN6-219ENST00000542848 GRIA2P42262 883 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 CLDN10P78369 228 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 IFRD2Q12894 506 aaPredicted RBP12.59□□□□□ -0.39
PTPN6-219ENST00000542848 ZNF667Q5HYK9 610 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 HECTD3Q5T447 861 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 TCEAL6Q6IPX3 200 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 ANO7Q6IWH7 933 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 IL17RCQ8NAC3 791 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 OLIG1Q8TAK6 271 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 PARD3BQ8TEW8 1205 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 TMEM174Q8WUU8 243 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 TCEAL3Q969E4 200 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 FBXO32Q969P5 355 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 TNIP3Q96KP6 325 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 KCNK16Q96T55 309 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 DUSP9Q99956 384 aaKnown RBP12.59□□□□□ -0.39
PTPN6-219ENST00000542848 EDEM2Q9BV94 578 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 TPSD1Q9BZJ3 242 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 BLZF1Q9H2G9 400 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 FAM13BQ9NYF5 915 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 IL37Q9NZH6 218 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 CHORDC1Q9UHD1 332 aaPredicted RBP12.59□□□□□ -0.39
PTPN6-219ENST00000542848 INVSQ9Y283 1065 aa12.59□□□□□ -0.39
PTPN6-219ENST00000542848 CHD6Q8TD26 2715 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 FRYQ5TBA9 3013 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 ANTXRLA6NF34 631 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 C4orf47A7E2U8 309 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 TNFRSF10BO14763 440 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 KHNYNO15037 678 aaKnown RBP12.58□□□□□ -0.4
PTPN6-219ENST00000542848 COCHO43405 550 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 KLF8O95600 359 aaPredicted RBP12.58□□□□□ -0.4
PTPN6-219ENST00000542848 C4BPAP04003 597 aaKnown RBP12.58□□□□□ -0.4
PTPN6-219ENST00000542848 CHRM1P11229 460 aaPredicted RBP12.58□□□□□ -0.4
PTPN6-219ENST00000542848 ADH5P11766 374 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 CASP1P29466 404 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 KIR2DL1P43626 348 aaPredicted RBP12.58□□□□□ -0.4
PTPN6-219ENST00000542848 TUBP50607 506 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 CDH8P55286 799 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 GAD2Q05329 585 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 CUL4BQ13620 913 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 PREPLQ4J6C6 727 aaPredicted RBP12.58□□□□□ -0.4
PTPN6-219ENST00000542848 EOGTQ5NDL2 527 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 DAB2IPQ5VWQ8 1189 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 RESP18Q5W5W9 173 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 ATL3Q6DD88 541 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 TMEM92Q6UXU6 159 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 PAQR9Q6ZVX9 377 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 ALLCQ8N6M5 410 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 TXNDC5Q8NBS9 432 aaKnown RBP12.58□□□□□ -0.4
PTPN6-219ENST00000542848 MDGA1Q8NFP4 955 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 SCAMP5Q8TAC9 235 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 KCNV2Q8TDN2 545 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 SMARCD1Q96GM5 515 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 SMYD3Q9H7B4 428 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 POLMQ9NP87 494 aaPredicted RBP12.58□□□□□ -0.4
PTPN6-219ENST00000542848 ARHGEF4Q9NR80 690 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 PCDHA7Q9UN72 937 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 CFAP47Q6ZTR5 3102 aa12.58□□□□□ -0.4
PTPN6-219ENST00000542848 LNP1A1A4G5 178 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 FAM92AA1XBS5 289 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 SGK1O00141 431 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 ZDHHC11BP0C7U3 371 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 HNRNPLP14866 589 aaKnown RBP eCLIP12.57□□□□□ -0.4
PTPN6-219ENST00000542848 BCKDHBP21953 392 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 TIE1P35590 1138 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 P2RY2P41231 377 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 AFMP43652 599 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 ME1P48163 572 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 CASP4P49662 377 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 MESP2Q0VG99 397 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 BIRC3Q13489 604 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 NCOA4Q13772 614 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 BYSLQ13895 437 aaKnown RBP12.57□□□□□ -0.4
PTPN6-219ENST00000542848 SGSM1Q2NKQ1 1148 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 ZNF699Q32M78 642 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 SPDYCQ5MJ68 293 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 LY6G5CQ5SRR4 150 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 EMC10Q5UCC4 262 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 BTBD8Q5XKL5 378 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 NUDT18Q6ZVK8 323 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 CYP2U1Q7Z449 544 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 FAM35AQ86V20 835 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 C12orf40Q86WS4 652 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 SLC9A9Q8IVB4 645 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 SFTPA1Q8IWL2 248 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms