RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 HIRAP54198 1017 aaPredicted RBP12.91□□□□□ -0.34
KDM3A-216ENST00000542128 RAB15P59190 212 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 SURF1Q15526 300 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 CHI3L2Q15782 390 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 HADHQ16836 314 aaKnown RBP12.91□□□□□ -0.34
KDM3A-216ENST00000542128 LRRC8EQ6NSJ5 796 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 POTEBQ6S5H4 581 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 ARMCX2Q7L311 632 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 SAPCD2Q86UD0 394 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 PLD3Q8IV08 490 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 SMYD1Q8NB12 490 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 EPB41L4AQ9HCS5 686 aaPredicted RBP12.91□□□□□ -0.34
KDM3A-216ENST00000542128 SMYD2Q9NRG4 433 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 C20orf96Q9NUD7 363 aaPredicted RBP12.91□□□□□ -0.34
KDM3A-216ENST00000542128 TBCCD1Q9NVR7 557 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 ORC6Q9Y5N6 252 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 HTR3EA5X5Y0 456 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 C16orf96A6NNT2 1141 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 CYP2C9P11712 490 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 IL10P22301 178 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 MXI1P50539 228 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 RFWD3Q6PCD5 774 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 CLNKQ7Z7G1 428 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 AGR3Q8TD06 166 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 IGDCC4Q8TDY8 1250 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 EBF3Q9H4W6 596 aa12.91□□□□□ -0.34
KDM3A-216ENST00000542128 CCDC85CA6NKD9 419 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 C2CD2LO14523 706 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 IDH3BO43837 385 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 ZNF12P17014 697 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 RNF139Q8WU17 664 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 ARL8BQ9NVJ2 186 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 NFIBO00712 420 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 ZBTB11O95625 1053 aaPredicted RBP12.9□□□□□ -0.34
KDM3A-216ENST00000542128 RCAN1P53805 252 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 INHBEP58166 350 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 MOB2Q70IA6 237 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 NUP93Q8N1F7 819 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 THEM5Q8N1Q8 247 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 ST13P5Q8NFI4 369 aaPredicted RBP12.9□□□□□ -0.34
KDM3A-216ENST00000542128 C7orf25Q9BPX7 421 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 CORO1BQ9BR76 489 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 RTFDC1Q9BY42 306 aaPredicted RBP12.9□□□□□ -0.34
KDM3A-216ENST00000542128 C2orf40Q9H1Z8 148 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 HMG20AQ9NP66 347 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 OSGEPQ9NPF4 335 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 SNX13Q9Y5W8 968 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 MYO9BQ13459 2157 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 FAM205AQ6ZU69 1335 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 A0A087X0B3 334 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 A0A0J9YVX5 310 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 HNRNPCL2B2RXH8 293 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 BGNP21810 368 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 TKTP29401 623 aaKnown RBP12.9□□□□□ -0.34
KDM3A-216ENST00000542128 NUDT2P50583 147 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 RALGDSQ12967 914 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 TRIM25Q14258 630 aaKnown RBP12.9□□□□□ -0.34
KDM3A-216ENST00000542128 DGKDQ16760 1214 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 TTC27Q6P3X3 843 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 POTEGQ6S5H5 508 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 C3orf62Q6ZUJ4 267 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 NOP9Q86U38 636 aaKnown RBP12.9□□□□□ -0.34
KDM3A-216ENST00000542128 FAM118BQ9BPY3 351 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 C1orf50Q9BV19 199 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 NMRK2Q9NPI5 230 aa12.9□□□□□ -0.34
KDM3A-216ENST00000542128 SPDYE16A6NNV3 312 aaPredicted RBP12.89□□□□□ -0.35
KDM3A-216ENST00000542128 HUS1O60921 280 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 TAC1P20366 129 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 CPT1AP50416 773 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 OXCT1P55809 520 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 GEMIN4P57678 1058 aaKnown RBP12.89□□□□□ -0.35
KDM3A-216ENST00000542128 ITKQ08881 620 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 PRPSAP1Q14558 356 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 MORF4L2Q15014 288 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 ELMOD1Q8N336 334 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 RYBPQ8N488 228 aaPredicted RBP12.89□□□□□ -0.35
KDM3A-216ENST00000542128 DEPDC1BQ8WUY9 529 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 MCRS1Q96EZ8 462 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 CADM1Q9BY67 442 aaKnown RBP12.89□□□□□ -0.35
KDM3A-216ENST00000542128 PCDH12Q9NPG4 1184 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 AP4B1Q9Y6B7 739 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 KIAA0391O15091 583 aaKnown RBP12.89□□□□□ -0.35
KDM3A-216ENST00000542128 BNIP3LO60238 219 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 KRT7P08729 469 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 PORP16435 677 aaPredicted RBP12.89□□□□□ -0.35
KDM3A-216ENST00000542128 POLR2EP19388 210 aaKnown RBP12.89□□□□□ -0.35
KDM3A-216ENST00000542128 S100A5P33763 92 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 NEK3P51956 506 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 XIAPP98170 497 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 CDC16Q13042 620 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 PTK7Q13308 1070 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 ZNF667Q5HYK9 610 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 KBTBD2Q8IY47 623 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 PHF20Q9BVI0 1012 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 MRPL47Q9HD33 250 aaKnown RBP12.89□□□□□ -0.35
KDM3A-216ENST00000542128 TMEM88BA6NKF7 163 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 DGKIO75912 1065 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 SMARCA1P28370 1054 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 MTM1Q13496 603 aa12.89□□□□□ -0.35
KDM3A-216ENST00000542128 NEDD8Q15843 81 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms