RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 TROVE2P10155 538 aaKnown RBP eCLIP9.54□□□□□ -0.88
THBS3-211ENST00000541990 RARBP10826 455 aa9.54□□□□□ -0.88
THBS3-211ENST00000541990 PGM1P36871 562 aa9.54□□□□□ -0.88
THBS3-211ENST00000541990 ALCAMQ13740 583 aa9.54□□□□□ -0.88
THBS3-211ENST00000541990 GRB14Q14449 540 aa9.54□□□□□ -0.88
THBS3-211ENST00000541990 CCNG2Q16589 344 aa9.54□□□□□ -0.88
THBS3-211ENST00000541990 TXNRD3NBQ6F5E7 133 aa9.54□□□□□ -0.88
THBS3-211ENST00000541990 TDRPQ86YL5 185 aa9.54□□□□□ -0.88
THBS3-211ENST00000541990 SLC9A9Q8IVB4 645 aa9.54□□□□□ -0.88
THBS3-211ENST00000541990 MCOLN2Q8IZK6 566 aa9.54□□□□□ -0.88
THBS3-211ENST00000541990 SLC7A3Q8WY07 619 aa9.54□□□□□ -0.88
THBS3-211ENST00000541990 C11orf70Q9BRQ4 267 aa9.54□□□□□ -0.88
THBS3-211ENST00000541990 FAM213AQ9BRX8 229 aa9.54□□□□□ -0.88
THBS3-211ENST00000541990 KATNBL1Q9H079 304 aa9.54□□□□□ -0.88
THBS3-211ENST00000541990 EBF3Q9H4W6 596 aa9.54□□□□□ -0.88
THBS3-211ENST00000541990 PSMC3IPQ9P2W1 217 aaPredicted RBP9.54□□□□□ -0.88
THBS3-211ENST00000541990 SAE1Q9UBE0 346 aaPredicted RBP9.54□□□□□ -0.88
THBS3-211ENST00000541990 TBX20Q9UMR3 447 aa9.54□□□□□ -0.88
THBS3-211ENST00000541990 RPL26L1Q9UNX3 145 aaKnown RBP9.54□□□□□ -0.88
THBS3-211ENST00000541990 TLL2Q9Y6L7 1015 aa9.54□□□□□ -0.88
THBS3-211ENST00000541990 MEI4A8MW99 385 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 SORBS2O94875 1100 aaKnown RBP9.53□□□□□ -0.88
THBS3-211ENST00000541990 ATG7O95352 703 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 IFNB1P01574 187 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 MYL2P10916 166 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 ESRRAP11474 423 aaPredicted RBP9.53□□□□□ -0.88
THBS3-211ENST00000541990 ATF7P17544 494 aaPredicted RBP9.53□□□□□ -0.88
THBS3-211ENST00000541990 NRLP54845 237 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 CDK16Q00536 496 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 CENPCQ03188 943 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 PRKCZQ05513 592 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 CDC16Q13042 620 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 CAPSQ13938 189 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 CES4AQ5XG92 561 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 XRRA1Q6P2D8 792 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 C17orf99Q6UX52 265 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 RIPOR1Q6ZS17 1223 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 APLFQ8IW19 511 aaPredicted RBP9.53□□□□□ -0.88
THBS3-211ENST00000541990 MZB1Q8WU39 189 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 TTC17Q96AE7 1141 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 SENP7Q9BQF6 1050 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 MANSC1Q9H8J5 431 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 ETNK2Q9NVF9 386 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 MORF4L1Q9UBU8 362 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 ZNF148Q9UQR1 794 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 SH3BP1Q9Y3L3 701 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 NFASCO94856 1347 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 LIASO43766 372 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 BAG2O95816 211 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 DLDP09622 509 aaKnown RBP9.53□□□□□ -0.88
THBS3-211ENST00000541990 UNGP13051 313 aaPredicted RBP9.53□□□□□ -0.88
THBS3-211ENST00000541990 ANPEPP15144 967 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 MAN1A1P33908 653 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 TNFSF9P41273 254 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 FLT3LGP49771 235 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 CETN1Q12798 172 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 CCDC142Q17RM4 750 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 FNBP1LQ5T0N5 605 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 SYCP2LQ5T4T6 812 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 EFCAB12Q6NXP0 572 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 XXYLT1Q8NBI6 393 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 PPFIBP2Q8ND30 876 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 RBM15BQ8NDT2 890 aaKnown RBP9.53□□□□□ -0.88
THBS3-211ENST00000541990 OR6J1Q8NGC5 347 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 PAFAH2Q99487 392 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 TMEM121Q9BTD3 319 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 MECRQ9BV79 373 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 PLVAPQ9BX97 442 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 TSSK1BQ9BXA7 367 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 PREBQ9HCU5 417 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 RABGEF1Q9UJ41 708 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 RBBP6Q7Z6E9 1792 aaKnown RBP9.53□□□□□ -0.88
THBS3-211ENST00000541990 UBE4BO95155 1302 aa9.53□□□□□ -0.88
THBS3-211ENST00000541990 hCG_2014768A0A024R1R8 64 aa9.52□□□□□ -0.88
THBS3-211ENST00000541990 TCRBV7S3A2A0A539 114 aa9.52□□□□□ -0.88
THBS3-211ENST00000541990 INO80B-WBP1J3KQ70 363 aa9.52□□□□□ -0.88
THBS3-211ENST00000541990 DGAT1O75907 488 aa9.52□□□□□ -0.88
THBS3-211ENST00000541990 KDSRQ06136 332 aa9.52□□□□□ -0.88
THBS3-211ENST00000541990 LRRC23Q53EV4 343 aaPredicted RBP9.52□□□□□ -0.88
THBS3-211ENST00000541990 RNASEH2BQ5TBB1 312 aaKnown RBP9.52□□□□□ -0.88
THBS3-211ENST00000541990 MFSD7Q6UXD7 560 aa9.52□□□□□ -0.88
THBS3-211ENST00000541990 RNF111Q6ZNA4 994 aa9.52□□□□□ -0.88
THBS3-211ENST00000541990 TMEM192Q8IY95 271 aa9.52□□□□□ -0.88
THBS3-211ENST00000541990 CAPNS2Q96L46 248 aa9.52□□□□□ -0.88
THBS3-211ENST00000541990 FAM111AQ96PZ2 611 aa9.52□□□□□ -0.88
THBS3-211ENST00000541990 TCHPQ9BT92 498 aa9.52□□□□□ -0.88
THBS3-211ENST00000541990 TRIM55Q9BYV6 548 aa9.52□□□□□ -0.88
THBS3-211ENST00000541990 INO80BQ9C086 356 aaPredicted RBP9.52□□□□□ -0.88
THBS3-211ENST00000541990 CXCL16Q9H2A7 254 aa9.52□□□□□ -0.88
THBS3-211ENST00000541990 CDHR5Q9HBB8 845 aa9.52□□□□□ -0.88
THBS3-211ENST00000541990 DMAP1Q9NPF5 467 aaPredicted RBP9.52□□□□□ -0.88
THBS3-211ENST00000541990 PDLIM7Q9NR12 457 aa9.52□□□□□ -0.88
THBS3-211ENST00000541990 MARCOQ9UEW3 520 aaPredicted RBP9.52□□□□□ -0.88
THBS3-211ENST00000541990 ZSWIM8A7E2V4 1837 aa9.52□□□□□ -0.89
THBS3-211ENST00000541990 MYH11P35749 1972 aa9.52□□□□□ -0.89
THBS3-211ENST00000541990 MANSC4A6NHS7 340 aaPredicted RBP9.52□□□□□ -0.89
THBS3-211ENST00000541990 ASB14A6NK59 587 aa9.52□□□□□ -0.89
THBS3-211ENST00000541990 B2RBV5 119 aa9.52□□□□□ -0.89
THBS3-211ENST00000541990 STK10O94804 968 aaKnown RBP9.52□□□□□ -0.89
THBS3-211ENST00000541990 PROSCO94903 275 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms