RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 PLA2G4CQ9UP65 541 aa11.1□□□□□ -0.63
GABRB3-204ENST00000541819 DRG1Q9Y295 367 aaKnown RBP11.1□□□□□ -0.63
GABRB3-204ENST00000541819 SMIM31A0A1B0GVY4 71 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 TSC22D2O75157 780 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 RBP3P10745 1247 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 COMTP21964 271 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 EN1Q05925 392 aaPredicted RBP11.09□□□□□ -0.63
GABRB3-204ENST00000541819 BOLA3Q53S33 107 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 C3orf20Q8ND61 904 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 CDK5RAP1Q96SZ6 601 aaKnown RBP11.09□□□□□ -0.63
GABRB3-204ENST00000541819 FAM118BQ9BPY3 351 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 HDHD2Q9H0R4 259 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 SLITRK2Q9H156 845 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 MTMR4Q9NYA4 1195 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 VPS51Q9UID3 782 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 STAU1O95793 577 aaKnown RBP11.09□□□□□ -0.63
GABRB3-204ENST00000541819 TMEM253P0C7T8 217 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 GTF2A2P52657 109 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 DSG1Q02413 1049 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 SLC44A4Q53GD3 710 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 SLC25A24Q6NUK1 477 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 CD302Q8IX05 232 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 DPF3Q92784 378 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 USP7Q93009 1102 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 S100A13Q99584 98 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 MRPL39Q9NYK5 338 aaKnown RBP11.09□□□□□ -0.63
GABRB3-204ENST00000541819 ADGRL3Q9HAR2 1447 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 LOC100653049A0A140TA62 436 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 ZNF185O15231 689 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 KRT34O76011 436 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 RHOBTB3O94955 611 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 GYS1P13807 737 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 MSH3P20585 1137 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 CHRNA5P30532 468 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 KPNA1P52294 538 aaPredicted RBP11.09□□□□□ -0.63
GABRB3-204ENST00000541819 SGCGQ13326 291 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 TAF13Q15543 124 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 TYW3Q6IPR3 259 aaKnown RBP11.09□□□□□ -0.63
GABRB3-204ENST00000541819 DDHD1Q8NEL9 900 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 DNAJC1Q96KC8 554 aaKnown RBP11.09□□□□□ -0.63
GABRB3-204ENST00000541819 FANCEQ9HB96 536 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 SNX8Q9Y5X2 465 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 TMEM120BA0PK00 339 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 CENPXA8MT69 81 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 H7C0S8 307 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 TIMM44O43615 452 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 NDUFB10O96000 172 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 THRAP10827 490 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 CCDC144BQ3MJ40 725 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 CTXN3Q4LDR2 81 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 TRPM8Q7Z2W7 1104 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 TLK2Q86UE8 772 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 SH2D3AQ9BRG2 576 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 CLEC4MQ9H2X3 399 aaPredicted RBP11.09□□□□□ -0.63
GABRB3-204ENST00000541819 BATF3Q9NR55 127 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 ATP6V1HQ9UI12 483 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 METP08581 1390 aa11.09□□□□□ -0.63
GABRB3-204ENST00000541819 SRGNP10124 158 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 TCF7P36402 384 aaPredicted RBP11.08□□□□□ -0.64
GABRB3-204ENST00000541819 RDM1Q8NG50 284 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 PPP1R10Q96QC0 940 aaKnown RBP11.08□□□□□ -0.64
GABRB3-204ENST00000541819 TRIM9Q9C026 710 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 INTS13Q9NVM9 706 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 KLHL3Q9UH77 587 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 NDOR1Q9UHB4 597 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 KIF1CO43896 1103 aaKnown RBP11.08□□□□□ -0.64
GABRB3-204ENST00000541819 PLA2G6O60733 806 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 MTRF1O75570 445 aaKnown RBP11.08□□□□□ -0.64
GABRB3-204ENST00000541819 F9P00740 461 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 TFE3P19532 575 aaPredicted RBP11.08□□□□□ -0.64
GABRB3-204ENST00000541819 CYP2A7P20853 494 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 ATP6V1B2P21281 511 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 TRIM25Q14258 630 aaKnown RBP11.08□□□□□ -0.64
GABRB3-204ENST00000541819 OR8H2Q8N162 312 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 SRBD1Q8N5C6 995 aaKnown RBP11.08□□□□□ -0.64
GABRB3-204ENST00000541819 SEC16BQ96JE7 1060 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 PACSIN1Q9BY11 444 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 SHCBP1LQ9BZQ2 653 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 CCSER1Q9C0I3 900 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 RNPEPQ9H4A4 650 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 VCPKMTQ9H867 229 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 PCDHB12Q9Y5F1 795 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 PIPSLA2A3N6 862 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 PHF20L1A8MW92 1017 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 TRIM49D1C9J1S8 452 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 PSTPIP1O43586 416 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 NUDT14O95848 222 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 RPLP2P05387 115 aaKnown RBP11.08□□□□□ -0.64
GABRB3-204ENST00000541819 CTCFP49711 727 aaPredicted RBP11.08□□□□□ -0.64
GABRB3-204ENST00000541819 STX4Q12846 297 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 PTPAQ15257 358 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 EZH2Q15910 746 aaKnown RBP11.08□□□□□ -0.64
GABRB3-204ENST00000541819 TCEAL5Q5H9L2 206 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 BRINP3Q76B58 766 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.08□□□□□ -0.64
GABRB3-204ENST00000541819 FLCNQ8NFG4 579 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 CIPCQ9C0C6 399 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 ELOVL6Q9H5J4 265 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 KLK14Q9P0G3 267 aa11.08□□□□□ -0.64
GABRB3-204ENST00000541819 LINC00854A0A1B0GVQ3 168 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms