RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 LXNQ9BS40 222 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 NUSAP1Q9BXS6 441 aaKnown RBP5.04□□□□□ -1.6
SNHG1-214ENST00000540865 LRRC3Q9BY71 257 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 FZD8Q9H461 694 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 ZSWIM4Q9H7M6 989 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 PRMT7Q9NVM4 692 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-214ENST00000540865 THG1LQ9NWX6 298 aaKnown RBP5.04□□□□□ -1.6
SNHG1-214ENST00000540865 FBXL5Q9UKA1 691 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 VAV3Q9UKW4 847 aa5.04□□□□□ -1.6
SNHG1-214ENST00000540865 KLF18A0A0U1RQI7 1052 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 I3L4J1 428 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 LYPLA2O95372 231 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 EGFP01133 1207 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 PRKCBP05771 671 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 TFE3P19532 575 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-214ENST00000540865 GLRA2P23416 452 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 BRCC3P46736 316 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 DGKEP52429 567 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 EPHB3P54753 998 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 NLRP5P59047 1200 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 EXOSC10Q01780 885 aaKnown RBP5.03□□□□□ -1.6
SNHG1-214ENST00000540865 RUNX3Q13761 415 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 SEPT6Q14141 434 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 DMC1Q14565 340 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 NECTIN1Q15223 517 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 DCAF4L1Q3SXM0 396 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 CTXN3Q4LDR2 81 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 TRIM61Q5EBN2 209 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 CDCA2Q69YH5 1023 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-214ENST00000540865 ZNF280DQ6N043 979 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 CCNI2Q6ZMN8 369 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-214ENST00000540865 TMC8Q8IU68 726 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 HDDC3Q8N4P3 179 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 BEST2Q8NFU1 509 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 CCDC26Q8TAB7 109 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 ADAMTS14Q8WXS8 1223 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 PIGKQ92643 395 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 LRIG1Q96JA1 1093 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 ZFYVE19Q96K21 471 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 FAM83CQ9BQN1 747 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 ADPGKQ9BRR6 497 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 SSBP4Q9BWG4 385 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-214ENST00000540865 KRTAP4-7Q9BYR0 210 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 LSG1Q9H089 658 aaKnown RBP5.03□□□□□ -1.6
SNHG1-214ENST00000540865 CXCL16Q9H2A7 254 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 SLKQ9H2G2 1235 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-214ENST00000540865 PDZD7Q9H5P4 517 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 KCNMB3Q9NPA1 279 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 SH3GLB2Q9NR46 395 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 GKN1Q9NS71 199 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 ANKEF1Q9NU02 776 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 POLR3BQ9NW08 1133 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-214ENST00000540865 RGL1Q9NZL6 768 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 DKK4Q9UBT3 224 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 DDX25Q9UHL0 483 aaKnown RBP5.03□□□□□ -1.6
SNHG1-214ENST00000540865 AP4E1Q9UPM8 1137 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 YIPF1Q9Y548 306 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 ASB3Q9Y575 518 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 MYH9P35579 1960 aaKnown RBP5.03□□□□□ -1.6
SNHG1-214ENST00000540865 COL4A2P08572 1712 aa5.03□□□□□ -1.6
SNHG1-214ENST00000540865 RALGAPA1Q6GYQ0 2036 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 PCNX2A6NKB5 2137 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 SMIM28A0A1B0GU29 152 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 CYSRT1A8MQ03 144 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 ACKR2O00590 384 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 PODXLO00592 558 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 SART1O43290 800 aaKnown RBP5.02□□□□□ -1.61
SNHG1-214ENST00000540865 SLC37A4O43826 429 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 SLITRK3O94933 977 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 TIAF1O95411 115 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 PRAMEF12O95522 483 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 IGHDP01880 384 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 ADH5P11766 374 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 ENGP17813 658 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 RPL9P32969 192 aaKnown RBP5.02□□□□□ -1.61
SNHG1-214ENST00000540865 HOXD12P35452 270 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 DHPSP49366 369 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-214ENST00000540865 GALK1P51570 392 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 ATXN3P54252 364 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-214ENST00000540865 FAM193AP78312 1265 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 FANCCQ00597 558 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 CYP4A11Q02928 519 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 FAM160A1Q05DH4 1040 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 SOX4Q06945 474 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-214ENST00000540865 PRPF4BQ13523 1007 aaKnown RBP5.02□□□□□ -1.61
SNHG1-214ENST00000540865 CTTNQ14247 550 aaKnown RBP5.02□□□□□ -1.61
SNHG1-214ENST00000540865 MAPK6Q16659 721 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 ARHGAP15Q53QZ3 475 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 XKR4Q5GH76 650 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 GLRA4Q5JXX5 417 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 SPDYCQ5MJ68 293 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 STXBP5Q5T5C0 1151 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 GPR158Q5T848 1215 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 ANKRD34AQ69YU3 496 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 PPP4R3AQ6IN85 833 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 SLC23A3Q6PIS1 610 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 GAREM2Q75VX8 874 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 LPCAT2Q7L5N7 544 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 RASSF3Q86WH2 238 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 SYT12Q8IV01 421 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms