RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 TRIM23P36406 574 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 DNM2P50570 870 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 ARHGDIBP52566 201 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 MRPS9P82933 396 aaKnown RBP13.12□□□□□ -0.31
DDX55-206ENST00000539934 SMARCB1Q12824 385 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 BAATQ14032 418 aaPredicted RBP13.12□□□□□ -0.31
DDX55-206ENST00000539934 TMEM132BQ14DG7 1078 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 CCDC85BQ15834 202 aaPredicted RBP13.12□□□□□ -0.31
DDX55-206ENST00000539934 RASIP1Q5U651 963 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 TMEM139Q8IV31 216 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 ALDH16A1Q8IZ83 802 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 MB21D1Q8N884 522 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 EXD1Q8NHP7 514 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 FAM136AQ96C01 138 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 PANX2Q96RD6 677 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 PDCD2LQ9BRP1 358 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 NOC4LQ9BVI4 516 aaKnown RBP13.12□□□□□ -0.31
DDX55-206ENST00000539934 APOL5Q9BWW9 433 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 TEX13BQ9BXU2 312 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 INTUQ9ULD6 942 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 ADAMTS5Q9UNA0 930 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 MYH11P35749 1972 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 KBTBD13C9JR72 458 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 EPN2O95208 641 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 ADORA2AP29274 412 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 IFNA8P32881 189 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 AP1B1Q10567 949 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 NFX1Q12986 1120 aaKnown RBP13.12□□□□□ -0.31
DDX55-206ENST00000539934 METTL2BQ6P1Q9 378 aaKnown RBP13.12□□□□□ -0.31
DDX55-206ENST00000539934 MIER3Q7Z3K6 550 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 NELFCDQ8IXH7 590 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 CEP19Q96LK0 163 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 PURBQ96QR8 312 aaKnown RBP13.12□□□□□ -0.31
DDX55-206ENST00000539934 NACC1Q96RE7 527 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 SECISBP2Q96T21 854 aaKnown RBP13.12□□□□□ -0.31
DDX55-206ENST00000539934 FGFBP2Q9BYJ0 223 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 AGO4Q9HCK5 861 aaKnown RBP13.12□□□□□ -0.31
DDX55-206ENST00000539934 LARSQ9P2J5 1176 aaKnown RBP13.12□□□□□ -0.31
DDX55-206ENST00000539934 PCDHA2Q9Y5H9 948 aa13.12□□□□□ -0.31
DDX55-206ENST00000539934 A0A1W2PQC6 194 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 ARHGAP10A1A4S6 786 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 GRXCR1A8MXD5 290 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 PQBP1O60828 265 aaKnown RBP13.11□□□□□ -0.31
DDX55-206ENST00000539934 PPP1R37O75864 691 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 ENO2P09104 434 aaPredicted RBP13.11□□□□□ -0.31
DDX55-206ENST00000539934 POLR2CP19387 275 aaPredicted RBP13.11□□□□□ -0.31
DDX55-206ENST00000539934 EMP3P54852 163 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 CCNA1P78396 465 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 DCTN2Q13561 401 aaKnown RBP13.11□□□□□ -0.31
DDX55-206ENST00000539934 GRB14Q14449 540 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 SQLEQ14534 574 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 BTBD8Q5XKL5 378 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 FOXR2Q6PJQ5 311 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 B3GNT9Q6UX72 402 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 KDM7AQ6ZMT4 941 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 SFR1Q86XK3 245 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 ANKMY2Q8IV38 441 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 CFAP61Q8NHU2 1237 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 CAGE1Q8TC20 777 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 CCDC51Q96ER9 411 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 LXNQ9BS40 222 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 TSEN34Q9BSV6 310 aaKnown RBP13.11□□□□□ -0.31
DDX55-206ENST00000539934 RUSC1Q9BVN2 902 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 CALN1Q9BXU9 219 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 KCTD10Q9H3F6 313 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 C8orf33Q9H7E9 229 aaPredicted RBP13.11□□□□□ -0.31
DDX55-206ENST00000539934 ACAD9Q9H845 621 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 WASH6PQ9NQA3 447 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 KIAA1217Q5T5P2 1943 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 SLC15A5A6NIM6 579 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 OR6C65A6NJZ3 312 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 SYCE1LA8MT33 242 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 INMTO95050 263 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 PGK1P00558 417 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 KRT20P35900 424 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 CCNFP41002 786 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 SMAD3P84022 425 aaKnown RBP13.11□□□□□ -0.31
DDX55-206ENST00000539934 FKBP3Q00688 224 aaKnown RBP13.11□□□□□ -0.31
DDX55-206ENST00000539934 RALGDSQ12967 914 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 HSP90AA5PQ58FG0 334 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 DENND2CQ68D51 928 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 RINT1Q6NUQ1 792 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 CROCCP3Q8IVE0 287 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 ZNF507Q8TCN5 953 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 SCFD1Q8WVM8 642 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 CCT6BQ92526 530 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 METTL2AQ96IZ6 378 aaKnown RBP13.11□□□□□ -0.31
DDX55-206ENST00000539934 OLFM3Q96PB7 478 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 TBC1D22BQ9NU19 505 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 GID8Q9NWU2 228 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 STRIP2Q9ULQ0 834 aa13.11□□□□□ -0.31
DDX55-206ENST00000539934 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.1□□□□□ -0.31
DDX55-206ENST00000539934 FADS2P1A8MWK0 482 aa13.1□□□□□ -0.31
DDX55-206ENST00000539934 ATP2A1O14983 1001 aa13.1□□□□□ -0.31
DDX55-206ENST00000539934 MSCO60682 206 aa13.1□□□□□ -0.31
DDX55-206ENST00000539934 FAM13AO94988 1023 aa13.1□□□□□ -0.31
DDX55-206ENST00000539934 DNAJB2P25686 324 aa13.1□□□□□ -0.31
DDX55-206ENST00000539934 CCND2P30279 289 aa13.1□□□□□ -0.31
DDX55-206ENST00000539934 ARFIP2P53365 341 aa13.1□□□□□ -0.31
DDX55-206ENST00000539934 DNAJC3Q13217 504 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms