RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 STRNO43815 780 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 BBOX1O75936 387 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 NPTX2P47972 431 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 MRPS5P82675 430 aaKnown RBP19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 TCP10Q12799 353 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 NCOA4Q13772 614 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 PGM2L1Q6PCE3 622 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 ZNF516Q92618 1163 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 AKT1S1Q96B36 256 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 RBM17Q96I25 401 aaKnown RBP19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 MCEEQ96PE7 176 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 SIKE1Q9BRV8 207 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 USP29Q9HBJ7 922 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 RHBDL2Q9NX52 303 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 PCDHB4Q9Y5E5 795 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 CCDC195A0A1B0GUA6 201 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 CLPTM1O96005 669 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 SNRPAP09012 282 aaKnown RBP19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 ITGB5P18084 799 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 YWHAGP61981 247 aaKnown RBP eCLIP19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 DYNLT1P63172 113 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 BTKQ06187 659 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 DMP1Q13316 513 aaPredicted RBP19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 PIGHQ14442 188 aaPredicted RBP19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 ANGEL2Q5VTE6 544 aaKnown RBP19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 OLFML2BQ68BL8 750 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 C1orf228Q6PIY5 440 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 MARVELD2Q8N4S9 558 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 DNAJC1Q96KC8 554 aaKnown RBP19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 MKS1Q9NXB0 559 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 AGTPBP1Q9UPW5 1226 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 MAD1L1Q9Y6D9 718 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 TEX264Q9Y6I9 313 aa19.34■□□□□ 0.69
SFSWAP-207ENST00000538548 HLA-DRAP01903 254 aa19.33■□□□□ 0.69
SFSWAP-207ENST00000538548 TFAP2AP05549 437 aa19.33■□□□□ 0.69
SFSWAP-207ENST00000538548 WEE2P0C1S8 567 aa19.33■□□□□ 0.69
SFSWAP-207ENST00000538548 TPP2P29144 1249 aaPredicted RBP19.33■□□□□ 0.69
SFSWAP-207ENST00000538548 BASP1P80723 227 aaKnown RBP19.33■□□□□ 0.69
SFSWAP-207ENST00000538548 TBL3Q12788 808 aaKnown RBP19.33■□□□□ 0.69
SFSWAP-207ENST00000538548 CUL2Q13617 745 aa19.33■□□□□ 0.69
SFSWAP-207ENST00000538548 DCUN1D2Q6PH85 259 aa19.33■□□□□ 0.69
SFSWAP-207ENST00000538548 DEFB132Q7Z7B7 95 aa19.33■□□□□ 0.69
SFSWAP-207ENST00000538548 ALDH16A1Q8IZ83 802 aa19.33■□□□□ 0.69
SFSWAP-207ENST00000538548 APBB2Q92870 758 aa19.33■□□□□ 0.69
SFSWAP-207ENST00000538548 EBF4Q9BQW3 602 aa19.33■□□□□ 0.69
SFSWAP-207ENST00000538548 SUDS3Q9H7L9 328 aaPredicted RBP19.33■□□□□ 0.69
SFSWAP-207ENST00000538548 TIMMDC1Q9NPL8 285 aa19.33■□□□□ 0.69
SFSWAP-207ENST00000538548 KCNH7Q9NS40 1196 aa19.33■□□□□ 0.69
SFSWAP-207ENST00000538548 ZNF180Q9UJW8 692 aa19.33■□□□□ 0.69
SFSWAP-207ENST00000538548 ZBTB21Q9ULJ3 1066 aa19.33■□□□□ 0.69
SFSWAP-207ENST00000538548 TMEM150BA6NC51 233 aa19.33■□□□□ 0.68
SFSWAP-207ENST00000538548 C3orf70A6NLC5 250 aaPredicted RBP19.33■□□□□ 0.68
SFSWAP-207ENST00000538548 DHX15O43143 795 aaKnown RBP19.33■□□□□ 0.68
SFSWAP-207ENST00000538548 COPAP53621 1224 aa19.33■□□□□ 0.68
SFSWAP-207ENST00000538548 HIRAP54198 1017 aaPredicted RBP19.33■□□□□ 0.68
SFSWAP-207ENST00000538548 EPHB1P54762 984 aa19.33■□□□□ 0.68
SFSWAP-207ENST00000538548 OGDHQ02218 1023 aa19.33■□□□□ 0.68
SFSWAP-207ENST00000538548 ZACNQ401N2 412 aa19.33■□□□□ 0.68
SFSWAP-207ENST00000538548 HSP90AA5PQ58FG0 334 aa19.33■□□□□ 0.68
SFSWAP-207ENST00000538548 SPOPLQ6IQ16 392 aa19.33■□□□□ 0.68
SFSWAP-207ENST00000538548 DNAJC24Q6P3W2 148 aa19.33■□□□□ 0.68
SFSWAP-207ENST00000538548 KLHDC10Q6PID8 442 aa19.33■□□□□ 0.68
SFSWAP-207ENST00000538548 TMC7Q7Z402 723 aa19.33■□□□□ 0.68
SFSWAP-207ENST00000538548 POLNQ7Z5Q5 900 aa19.33■□□□□ 0.68
SFSWAP-207ENST00000538548 PNPLA8Q9NP80 782 aa19.33■□□□□ 0.68
SFSWAP-207ENST00000538548 A0A0J9YVX5 310 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 TTLL13PA6NNM8 815 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 DENRO43583 198 aaKnown RBP19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 CST8O60676 142 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 CALB1P05937 261 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 RAG1P15918 1043 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 SERPINB6P35237 376 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 SFSWAPQ12872 951 aaKnown RBP19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 RALGPS1Q5JS13 557 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 BBS12Q6ZW61 710 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 ACTRT2Q8TDY3 377 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 FAM213AQ9BRX8 229 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 C20orf27Q9GZN8 174 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 CDH22Q9UJ99 828 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 MRPL11Q9Y3B7 192 aaKnown RBP19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 TCRBV5S1A1TA0A578 114 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 KLHL2O95198 593 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 FDFT1P37268 417 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 CYLC2Q14093 348 aaPredicted RBP19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 LGSNQ5TDP6 509 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 NIPA2Q8N8Q9 360 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 PPP1R14BQ96C90 147 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 MAML3Q96JK9 1138 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 ZFRQ96KR1 1074 aaKnown RBP19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 NLRP4Q96MN2 994 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 KMT5AQ9NQR1 393 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 PLK2Q9NYY3 685 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 ITGA11Q9UKX5 1188 aa19.32■□□□□ 0.68
SFSWAP-207ENST00000538548 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 CYB561D2O14569 222 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 BIRC5O15392 142 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 CLCN2P51788 898 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 CACNB3P54284 484 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 CLDN10P78369 228 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 SULT2A1Q06520 285 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms