RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 TRIM21P19474 475 aaKnown RBP13.9□□□□□ -0.18
PRKDC-206ENST00000536429 ERCC5P28715 1186 aaPredicted RBP13.9□□□□□ -0.18
PRKDC-206ENST00000536429 CTHP32929 405 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 PLA2G5P39877 138 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 PPP3CCP48454 512 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 KIF11P52732 1056 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 PTPN5P54829 565 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 SLC7A9P82251 487 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 PLCB2Q00722 1185 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 CETN1Q12798 172 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 SNX30Q5VWJ9 437 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 PDZD8Q8NEN9 1154 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 OVCA2Q8WZ82 227 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 WBP2Q969T9 261 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 ZFRQ96KR1 1074 aaKnown RBP13.9□□□□□ -0.18
PRKDC-206ENST00000536429 FAM124BQ9H5Z6 455 aaPredicted RBP13.9□□□□□ -0.18
PRKDC-206ENST00000536429 SAMSN1Q9NSI8 373 aaKnown RBP13.9□□□□□ -0.18
PRKDC-206ENST00000536429 COMMD8Q9NX08 183 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 TSPAN16Q9UKR8 245 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 SCML2Q9UQR0 700 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 PCDHB4Q9Y5E5 795 aa13.9□□□□□ -0.18
PRKDC-206ENST00000536429 A0A1W2PQH9 124 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 GOLGA6L22H0YM25 854 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 O00370 1275 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 MAN2B1O00754 1011 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 MBL2P11226 248 aaPredicted RBP13.89□□□□□ -0.19
PRKDC-206ENST00000536429 TCF3P15923 654 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 PFKLP17858 780 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 SLC9A1P19634 815 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 MTIF2P46199 727 aaKnown RBP13.89□□□□□ -0.19
PRKDC-206ENST00000536429 ZNF132P52740 706 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 NUBP1P53384 320 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 YWHAEP62258 255 aaKnown RBP13.89□□□□□ -0.19
PRKDC-206ENST00000536429 RUNX3Q13761 415 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 ANGPT1Q15389 498 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 TPD52L1Q16890 204 aaPredicted RBP13.89□□□□□ -0.19
PRKDC-206ENST00000536429 EML3Q32P44 896 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 ITPRIPL2Q3MIP1 535 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 HECTD3Q5T447 861 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 C11orf57Q6ZUT1 292 aaPredicted RBP13.89□□□□□ -0.19
PRKDC-206ENST00000536429 SCD5Q86SK9 330 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 PIGZQ86VD9 579 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 ANKRD52Q8NB46 1076 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 UBA3Q8TBC4 463 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 OSCP1Q8WVF1 389 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 CLDN23Q96B33 292 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 FAM122AQ96E09 287 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 PRRX2Q99811 253 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 OSBPL6Q9BZF3 934 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 FBXO44Q9H4M3 255 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 THAP9Q9H5L6 903 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 C8orf33Q9H7E9 229 aaPredicted RBP13.89□□□□□ -0.19
PRKDC-206ENST00000536429 PNPLA8Q9NP80 782 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 RBM12Q9NTZ6 932 aaKnown RBP13.89□□□□□ -0.19
PRKDC-206ENST00000536429 DUS2Q9NX74 493 aaKnown RBP13.89□□□□□ -0.19
PRKDC-206ENST00000536429 AJAP1Q9UKB5 411 aaPredicted RBP13.89□□□□□ -0.19
PRKDC-206ENST00000536429 NUDT5Q9UKK9 219 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 USP3Q9Y6I4 520 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 DENND4CQ5VZ89 1909 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 TICRRQ7Z2Z1 1910 aa13.89□□□□□ -0.19
PRKDC-206ENST00000536429 ANAPC1Q9H1A4 1944 aa13.88□□□□□ -0.19
PRKDC-206ENST00000536429 MDM4O15151 490 aa13.88□□□□□ -0.19
PRKDC-206ENST00000536429 CHRNB1P11230 501 aa13.88□□□□□ -0.19
PRKDC-206ENST00000536429 VDRP11473 427 aa13.88□□□□□ -0.19
PRKDC-206ENST00000536429 BRD2P25440 801 aaKnown RBP13.88□□□□□ -0.19
PRKDC-206ENST00000536429 PDE6CP51160 858 aa13.88□□□□□ -0.19
PRKDC-206ENST00000536429 MLLT6P55198 1093 aaPredicted RBP13.88□□□□□ -0.19
PRKDC-206ENST00000536429 GCNT1Q02742 428 aa13.88□□□□□ -0.19
PRKDC-206ENST00000536429 PDE4CQ08493 712 aa13.88□□□□□ -0.19
PRKDC-206ENST00000536429 PON2Q15165 354 aa13.88□□□□□ -0.19
PRKDC-206ENST00000536429 SGO2Q562F6 1265 aa13.88□□□□□ -0.19
PRKDC-206ENST00000536429 MIIPQ5JXC2 388 aa13.88□□□□□ -0.19
PRKDC-206ENST00000536429 CC2D1AQ6P1N0 951 aaPredicted RBP13.88□□□□□ -0.19
PRKDC-206ENST00000536429 MAML2Q8IZL2 1156 aaPredicted RBP13.88□□□□□ -0.19
PRKDC-206ENST00000536429 RBBP8NLQ8NC74 664 aaPredicted RBP13.88□□□□□ -0.19
PRKDC-206ENST00000536429 NDRG1Q92597 394 aaKnown RBP13.88□□□□□ -0.19
PRKDC-206ENST00000536429 FBRSL1Q9HCM7 1045 aaKnown RBP13.88□□□□□ -0.19
PRKDC-206ENST00000536429 UBE2TQ9NPD8 197 aaPredicted RBP13.88□□□□□ -0.19
PRKDC-206ENST00000536429 CFAP97Q9P2B7 532 aa13.88□□□□□ -0.19
PRKDC-206ENST00000536429 DACH1Q9UI36 760 aa13.88□□□□□ -0.19
PRKDC-206ENST00000536429 PIEZO1Q92508 2521 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 TLR5O60602 858 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 GABBR2O75899 941 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 PAEPP09466 180 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 IFNAR2P48551 515 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 TUBP50607 506 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 GAS6Q14393 721 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 PDGFRLQ15198 375 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 MAN2A1Q16706 1144 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 PKDCCQ504Y2 493 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 RAB41Q5JT25 222 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 TRIM65Q6PJ69 517 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 RALGPS2Q86X27 583 aaPredicted RBP13.87□□□□□ -0.19
PRKDC-206ENST00000536429 C1orf210Q8IVY1 113 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 ATOH1Q92858 354 aaPredicted RBP13.87□□□□□ -0.19
PRKDC-206ENST00000536429 NELL2Q99435 816 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 DNAI2Q9GZS0 605 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 ECT2Q9H8V3 914 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 LMAN1LQ9HAT1 526 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 SIX2Q9NPC8 291 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms