RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 GMIPQ9P107 970 aa23.05■■□□□ 1.28
SSPN-204ENST00000535504 CHORDC1Q9UHD1 332 aaPredicted RBP23.05■■□□□ 1.28
SSPN-204ENST00000535504 ARHGAP26Q9UNA1 814 aa23.05■■□□□ 1.28
SSPN-204ENST00000535504 SYCE3A1L190 88 aa23.04■■□□□ 1.28
SSPN-204ENST00000535504 O00370 1275 aa23.04■■□□□ 1.28
SSPN-204ENST00000535504 MAN2B1O00754 1011 aa23.04■■□□□ 1.28
SSPN-204ENST00000535504 CAVIN2O95810 425 aa23.04■■□□□ 1.28
SSPN-204ENST00000535504 IFNAR2P48551 515 aa23.04■■□□□ 1.28
SSPN-204ENST00000535504 ZNF165P49910 485 aa23.04■■□□□ 1.28
SSPN-204ENST00000535504 AMPD2Q01433 879 aa23.04■■□□□ 1.28
SSPN-204ENST00000535504 PTK2Q05397 1052 aa23.04■■□□□ 1.28
SSPN-204ENST00000535504 RAPGEF1Q13905 1077 aa23.04■■□□□ 1.28
SSPN-204ENST00000535504 CNGA2Q16280 664 aa23.04■■□□□ 1.28
SSPN-204ENST00000535504 POTEHQ6S545 545 aa23.04■■□□□ 1.28
SSPN-204ENST00000535504 LCLAT1Q6UWP7 414 aa23.04■■□□□ 1.28
SSPN-204ENST00000535504 PIGZQ86VD9 579 aa23.04■■□□□ 1.28
SSPN-204ENST00000535504 EXOC4Q96A65 974 aa23.04■■□□□ 1.28
SSPN-204ENST00000535504 LSM14BQ9BX40 385 aaKnown RBP23.04■■□□□ 1.28
SSPN-204ENST00000535504 TBC1D17Q9HA65 648 aa23.04■■□□□ 1.28
SSPN-204ENST00000535504 DNAJC12Q9UKB3 198 aa23.04■■□□□ 1.28
SSPN-204ENST00000535504 FAM92AA1XBS5 289 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 NCAM2O15394 837 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 THAP12O43422 761 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 GLULP15104 373 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 BRD2P25440 801 aaKnown RBP23.03■■□□□ 1.28
SSPN-204ENST00000535504 GNA15P30679 374 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 CLCN5P51795 746 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 KIF11P52732 1056 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 BPIFB4P59827 614 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 SLC7A9P82251 487 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 MTF1Q14872 753 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 PDGFRLQ15198 375 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 FILIP1LQ4L180 1135 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 SNX30Q5VWJ9 437 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 ASTLQ6HA08 431 aaPredicted RBP23.03■■□□□ 1.28
SSPN-204ENST00000535504 ZNF852Q6ZMS4 543 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 TPRG1Q6ZUI0 275 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 SH3RF2Q8TEC5 729 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 GOLGA1Q92805 767 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 CYP2S1Q96SQ9 504 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 C8orf33Q9H7E9 229 aaPredicted RBP23.03■■□□□ 1.28
SSPN-204ENST00000535504 NAGPAQ9UK23 515 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.03■■□□□ 1.28
SSPN-204ENST00000535504 DAAM1Q9Y4D1 1078 aa23.03■■□□□ 1.28
SSPN-204ENST00000535504 SLC9A3R1O14745 358 aaPredicted RBP23.02■■□□□ 1.28
SSPN-204ENST00000535504 OAS1P00973 400 aaKnown RBP23.02■■□□□ 1.28
SSPN-204ENST00000535504 PLA2G4AP47712 749 aa23.02■■□□□ 1.28
SSPN-204ENST00000535504 COPB1P53618 953 aaKnown RBP23.02■■□□□ 1.28
SSPN-204ENST00000535504 PDE4CQ08493 712 aa23.02■■□□□ 1.28
SSPN-204ENST00000535504 CCDC186Q7Z3E2 898 aa23.02■■□□□ 1.28
SSPN-204ENST00000535504 UBA3Q8TBC4 463 aa23.02■■□□□ 1.28
SSPN-204ENST00000535504 NELL2Q99435 816 aa23.02■■□□□ 1.28
SSPN-204ENST00000535504 PRRX2Q99811 253 aa23.02■■□□□ 1.28
SSPN-204ENST00000535504 HEBP1Q9NRV9 189 aa23.02■■□□□ 1.28
SSPN-204ENST00000535504 LIMA1Q9UHB6 759 aaKnown RBP23.02■■□□□ 1.28
SSPN-204ENST00000535504 CNTN6Q9UQ52 1028 aa23.02■■□□□ 1.28
SSPN-204ENST00000535504 CEP83Q9Y592 693 aa23.02■■□□□ 1.28
SSPN-204ENST00000535504 CPQQ9Y646 472 aa23.02■■□□□ 1.28
SSPN-204ENST00000535504 MUC3AQ02505 3323 aa23.02■■□□□ 1.28
SSPN-204ENST00000535504 MYO16Q9Y6X6 1858 aa23.02■■□□□ 1.28
SSPN-204ENST00000535504 PATJQ8NI35 1801 aa23.01■■□□□ 1.27
SSPN-204ENST00000535504 HHLA1C9JL84 531 aa23.01■■□□□ 1.27
SSPN-204ENST00000535504 CYP26A1O43174 497 aa23.01■■□□□ 1.27
SSPN-204ENST00000535504 TLR5O60602 858 aa23.01■■□□□ 1.27
SSPN-204ENST00000535504 TCF3P15923 654 aa23.01■■□□□ 1.27
SSPN-204ENST00000535504 ATP5C1P36542 298 aaKnown RBP23.01■■□□□ 1.27
SSPN-204ENST00000535504 TKTL1P51854 596 aa23.01■■□□□ 1.27
SSPN-204ENST00000535504 ZNF132P52740 706 aa23.01■■□□□ 1.27
SSPN-204ENST00000535504 NR1H3Q13133 447 aa23.01■■□□□ 1.27
SSPN-204ENST00000535504 GJB7Q6PEY0 223 aa23.01■■□□□ 1.27
SSPN-204ENST00000535504 GPRIN1Q7Z2K8 1008 aa23.01■■□□□ 1.27
SSPN-204ENST00000535504 TTC30AQ86WT1 665 aa23.01■■□□□ 1.27
SSPN-204ENST00000535504 RSPRY1Q96DX4 576 aa23.01■■□□□ 1.27
SSPN-204ENST00000535504 PDCL3Q9H2J4 239 aa23.01■■□□□ 1.27
SSPN-204ENST00000535504 DUS2Q9NX74 493 aaKnown RBP23.01■■□□□ 1.27
SSPN-204ENST00000535504 CCL26Q9Y258 94 aa23.01■■□□□ 1.27
SSPN-204ENST00000535504 SH3BP1Q9Y3L3 701 aa23.01■■□□□ 1.27
SSPN-204ENST00000535504 PIAS3Q9Y6X2 628 aa23.01■■□□□ 1.27
SSPN-204ENST00000535504 ANAPC1Q9H1A4 1944 aa23.01■■□□□ 1.27
SSPN-204ENST00000535504 KANSL1LA0AUZ9 987 aa23■■□□□ 1.27
SSPN-204ENST00000535504 KRBA1A5PL33 1030 aa23■■□□□ 1.27
SSPN-204ENST00000535504 ZBED1O96006 694 aa23■■□□□ 1.27
SSPN-204ENST00000535504 MLLT6P55198 1093 aaPredicted RBP23■■□□□ 1.27
SSPN-204ENST00000535504 SNX16P57768 344 aa23■■□□□ 1.27
SSPN-204ENST00000535504 STARD6P59095 220 aa23■■□□□ 1.27
SSPN-204ENST00000535504 UBXN1Q04323 297 aa23■■□□□ 1.27
SSPN-204ENST00000535504 USP4Q13107 963 aa23■■□□□ 1.27
SSPN-204ENST00000535504 UBXN2BQ14CS0 331 aa23■■□□□ 1.27
SSPN-204ENST00000535504 ITPRIPL2Q3MIP1 535 aa23■■□□□ 1.27
SSPN-204ENST00000535504 RSRC2Q7L4I2 434 aaKnown RBP23■■□□□ 1.27
SSPN-204ENST00000535504 CPA6Q8N4T0 437 aa23■■□□□ 1.27
SSPN-204ENST00000535504 KIAA1958Q8N8K9 716 aa23■■□□□ 1.27
SSPN-204ENST00000535504 TFAP2BQ92481 460 aa23■■□□□ 1.27
SSPN-204ENST00000535504 SHC3Q92529 594 aa23■■□□□ 1.27
SSPN-204ENST00000535504 ATP2A3Q93084 1043 aa23■■□□□ 1.27
SSPN-204ENST00000535504 NOX5Q96PH1 765 aa23■■□□□ 1.27
SSPN-204ENST00000535504 SLC22A12Q96S37 553 aa23■■□□□ 1.27
SSPN-204ENST00000535504 GKN1Q9NS71 199 aa23■■□□□ 1.27
SSPN-204ENST00000535504 SMPD4Q9NXE4 827 aa23■■□□□ 1.27
SSPN-204ENST00000535504 LSM7Q9UK45 103 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms