RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 ARFIP2P53365 341 aa3.67□□□□□ -1.82
BRCA2-205ENST00000533776 SLC13A2Q13183 592 aa3.67□□□□□ -1.82
BRCA2-205ENST00000533776 PTCHD4Q6ZW05 846 aa3.67□□□□□ -1.82
BRCA2-205ENST00000533776 DAAM2Q86T65 1068 aa3.67□□□□□ -1.82
BRCA2-205ENST00000533776 PPP1R35Q8TAP8 253 aa3.67□□□□□ -1.82
BRCA2-205ENST00000533776 ZNF398Q8TD17 642 aa3.67□□□□□ -1.82
BRCA2-205ENST00000533776 PNISRQ8TF01 805 aaKnown RBP3.67□□□□□ -1.82
BRCA2-205ENST00000533776 KBTBD7Q8WVZ9 684 aa3.67□□□□□ -1.82
BRCA2-205ENST00000533776 SLC12A5Q9H2X9 1139 aa3.67□□□□□ -1.82
BRCA2-205ENST00000533776 ZMAT3Q9HA38 289 aaKnown RBP3.67□□□□□ -1.82
BRCA2-205ENST00000533776 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.67□□□□□ -1.82
BRCA2-205ENST00000533776 GABBR1Q9UBS5 961 aa3.67□□□□□ -1.82
BRCA2-205ENST00000533776 DRG1Q9Y295 367 aaKnown RBP3.67□□□□□ -1.82
BRCA2-205ENST00000533776 LOC105371045A0A1W2PR82 267 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 FAM90A10PA6NDY2 464 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 TBC1D4O60343 1298 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 UBXN7O94888 489 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 ABLIM3O94929 683 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 APEHP13798 732 aaKnown RBP3.66□□□□□ -1.82
BRCA2-205ENST00000533776 CCKARP32238 428 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 DIO1P49895 249 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 MTHFSP49914 203 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 HTRA4P83105 476 aaPredicted RBP3.66□□□□□ -1.82
BRCA2-205ENST00000533776 ID2Q02363 134 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 RAB32Q13637 225 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 CCNIQ14094 377 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 LARS2Q15031 903 aaKnown RBP3.66□□□□□ -1.82
BRCA2-205ENST00000533776 SEC23BQ15437 767 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 MIDNQ504T8 468 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 TMTC4Q5T4D3 741 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 DCAF12L1Q5VU92 463 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 CACHD1Q5VU97 1274 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 DCDC5Q6ZRR9 648 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 COL23A1Q86Y22 540 aaPredicted RBP3.66□□□□□ -1.82
BRCA2-205ENST00000533776 MAFAQ8NHW3 353 aaPredicted RBP3.66□□□□□ -1.82
BRCA2-205ENST00000533776 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.66□□□□□ -1.82
BRCA2-205ENST00000533776 LRGUKQ96M69 825 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 HS6ST2Q96MM7 605 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 SIGLEC11Q96RL6 698 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 SNX15Q9NRS6 342 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 USP22Q9UPT9 525 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 LRP12Q9Y561 859 aa3.66□□□□□ -1.82
BRCA2-205ENST00000533776 CD8B2A6NJW9 211 aa3.65□□□□□ -1.83
BRCA2-205ENST00000533776 H3BML4 177 aa3.65□□□□□ -1.83
BRCA2-205ENST00000533776 H3BNX3 289 aa3.65□□□□□ -1.83
BRCA2-205ENST00000533776 PRKAR1BP31321 381 aa3.65□□□□□ -1.83
BRCA2-205ENST00000533776 BCAT1P54687 386 aa3.65□□□□□ -1.83
BRCA2-205ENST00000533776 TWIST1Q15672 202 aa3.65□□□□□ -1.83
BRCA2-205ENST00000533776 C4orf46Q504U0 113 aa3.65□□□□□ -1.83
BRCA2-205ENST00000533776 DENND2CQ68D51 928 aa3.65□□□□□ -1.83
BRCA2-205ENST00000533776 ZDHHC24Q6UX98 284 aa3.65□□□□□ -1.83
BRCA2-205ENST00000533776 PIP4P1Q86T03 277 aa3.65□□□□□ -1.83
BRCA2-205ENST00000533776 FAM177A1Q8N128 213 aaPredicted RBP3.65□□□□□ -1.83
BRCA2-205ENST00000533776 ZNF548Q8NEK5 533 aaPredicted RBP3.65□□□□□ -1.83
BRCA2-205ENST00000533776 DPH1Q9BZG8 443 aa3.65□□□□□ -1.83
BRCA2-205ENST00000533776 SMURF2Q9HAU4 748 aa3.65□□□□□ -1.83
BRCA2-205ENST00000533776 POT1Q9NUX5 634 aa3.65□□□□□ -1.83
BRCA2-205ENST00000533776 HEY2Q9UBP5 337 aa3.65□□□□□ -1.83
BRCA2-205ENST00000533776 CDY1Q9Y6F8 540 aa3.65□□□□□ -1.83
BRCA2-205ENST00000533776 SQORQ9Y6N5 450 aa3.65□□□□□ -1.83
BRCA2-205ENST00000533776 ZMYM2Q9UBW7 1377 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 ANKRD62A6NC57 917 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 M0R3H8 397 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 SPRY2O43597 315 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 RGS10O43665 173 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 OAZ2O95190 189 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 RASAL1O95294 804 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 ALPLP05186 524 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 MYBP10242 640 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 PSG1P11464 419 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 CREB1P16220 341 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 HSPA6P17066 643 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 EPHA3P29320 983 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 THBS4P35443 961 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 HTR6P50406 440 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 ITGA8P53708 1063 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 KCNB1Q14721 858 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 LEXMQ3ZCV2 418 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 CC2D1BQ5T0F9 858 aaKnown RBP3.64□□□□□ -1.83
BRCA2-205ENST00000533776 KIAA1161Q6NSJ0 714 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 RANBP10Q6VN20 620 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 MEPCEQ7L2J0 689 aaKnown RBP3.64□□□□□ -1.83
BRCA2-205ENST00000533776 KCTD20Q7Z5Y7 419 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 ANKRD13BQ86YJ7 626 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 RAB11FIP4Q86YS3 637 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 LIX1LQ8IVB5 337 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 LINC01465Q8N7H1 131 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 ZCRB1Q8TBF4 217 aaKnown RBP3.64□□□□□ -1.83
BRCA2-205ENST00000533776 MAML1Q92585 1016 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 CTHRC1Q96CG8 243 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 ZBTB45Q96K62 511 aaPredicted RBP3.64□□□□□ -1.83
BRCA2-205ENST00000533776 MARK4Q96L34 752 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 PPP1R9BQ96SB3 815 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 ACO2Q99798 780 aaKnown RBP3.64□□□□□ -1.83
BRCA2-205ENST00000533776 VN1R3Q9BXE9 311 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 NMRK2Q9NPI5 230 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 NOTCH4Q99466 2003 aa3.64□□□□□ -1.83
BRCA2-205ENST00000533776 CD3EAPO15446 510 aaKnown RBP3.63□□□□□ -1.83
BRCA2-205ENST00000533776 PHGDHO43175 533 aaKnown RBP3.63□□□□□ -1.83
BRCA2-205ENST00000533776 TLR2O60603 784 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms