RNA–Protein interactions for RNA: ENST00000533678.1

RDX-214, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-214ENST00000533678 PIAS3Q9Y6X2 628 aa17.33■□□□□ 0.36
RDX-214ENST00000533678 MYO16Q9Y6X6 1858 aa17.33■□□□□ 0.36
RDX-214ENST00000533678 GTPBP10A4D1E9 387 aaKnown RBP17.32■□□□□ 0.36
RDX-214ENST00000533678 PRR23AA6NEV1 266 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 FAM170BA6NMN3 283 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 HHLA1C9JL84 531 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 PROB1E7EW31 1015 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 ABL1P00519 1130 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 PAEPP09466 180 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 VDRP11473 427 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 KPNA1P52294 538 aaPredicted RBP17.32■□□□□ 0.36
RDX-214ENST00000533678 AMPD2Q01433 879 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 MTF1Q14872 753 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 UBXN2BQ14CS0 331 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 ZNF77Q15935 545 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 ITPRIPL2Q3MIP1 535 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 HECTD3Q5T447 861 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 ASCL5Q7RTU5 278 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 RALGPS2Q86X27 583 aaPredicted RBP17.32■□□□□ 0.36
RDX-214ENST00000533678 DDX42Q86XP3 938 aaKnown RBP eCLIP17.32■□□□□ 0.36
RDX-214ENST00000533678 IRF2BP1Q8IU81 584 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 ANKRD52Q8NB46 1076 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 DTWD2Q8NBA8 298 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 FAM3CQ92520 227 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 FOXQ1Q9C009 403 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 TLR8Q9NR97 1041 aaKnown RBP17.32■□□□□ 0.36
RDX-214ENST00000533678 GKN1Q9NS71 199 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 CHORDC1Q9UHD1 332 aaPredicted RBP17.32■□□□□ 0.36
RDX-214ENST00000533678 SCML2Q9UQR0 700 aa17.32■□□□□ 0.36
RDX-214ENST00000533678 ZFHX2Q9C0A1 2572 aaPredicted RBP17.31■□□□□ 0.36
RDX-214ENST00000533678 SYCE3A1L190 88 aa17.31■□□□□ 0.36
RDX-214ENST00000533678 MTIF2P46199 727 aaKnown RBP17.31■□□□□ 0.36
RDX-214ENST00000533678 TYRO3Q06418 890 aa17.31■□□□□ 0.36
RDX-214ENST00000533678 USP4Q13107 963 aa17.31■□□□□ 0.36
RDX-214ENST00000533678 RUNX3Q13761 415 aa17.31■□□□□ 0.36
RDX-214ENST00000533678 SGO2Q562F6 1265 aa17.31■□□□□ 0.36
RDX-214ENST00000533678 GBP6Q6ZN66 633 aa17.31■□□□□ 0.36
RDX-214ENST00000533678 ENOSF1Q7L5Y1 443 aa17.31■□□□□ 0.36
RDX-214ENST00000533678 SH3RF2Q8TEC5 729 aa17.31■□□□□ 0.36
RDX-214ENST00000533678 OSCP1Q8WVF1 389 aa17.31■□□□□ 0.36
RDX-214ENST00000533678 CLDN23Q96B33 292 aa17.31■□□□□ 0.36
RDX-214ENST00000533678 ZFYVE19Q96K21 471 aa17.31■□□□□ 0.36
RDX-214ENST00000533678 INTS2Q9H0H0 1204 aaKnown RBP17.31■□□□□ 0.36
RDX-214ENST00000533678 DLGAP2Q9P1A6 1054 aa17.31■□□□□ 0.36
RDX-214ENST00000533678 PCDHB4Q9Y5E5 795 aa17.31■□□□□ 0.36
RDX-214ENST00000533678 TPM2P07951 284 aa17.3■□□□□ 0.36
RDX-214ENST00000533678 ACO1P21399 889 aaKnown RBP17.3■□□□□ 0.36
RDX-214ENST00000533678 RPS9P46781 194 aaKnown RBP17.3■□□□□ 0.36
RDX-214ENST00000533678 PSEN1P49768 467 aa17.3■□□□□ 0.36
RDX-214ENST00000533678 KIF11P52732 1056 aa17.3■□□□□ 0.36
RDX-214ENST00000533678 STILQ15468 1287 aa17.3■□□□□ 0.36
RDX-214ENST00000533678 MAN2A1Q16706 1144 aa17.3■□□□□ 0.36
RDX-214ENST00000533678 TMEM270Q6UE05 265 aa17.3■□□□□ 0.36
RDX-214ENST00000533678 ENOX1Q8TC92 643 aaKnown RBP17.3■□□□□ 0.36
RDX-214ENST00000533678 EXOC4Q96A65 974 aa17.3■□□□□ 0.36
RDX-214ENST00000533678 IER2Q9BTL4 223 aa17.3■□□□□ 0.36
RDX-214ENST00000533678 RNF38Q9H0F5 515 aa17.3■□□□□ 0.36
RDX-214ENST00000533678 DUS2Q9NX74 493 aaKnown RBP17.3■□□□□ 0.36
RDX-214ENST00000533678 GTSE1Q9NYZ3 720 aa17.3■□□□□ 0.36
RDX-214ENST00000533678 GMIPQ9P107 970 aa17.3■□□□□ 0.36
RDX-214ENST00000533678 HESX1Q9UBX0 185 aa17.3■□□□□ 0.36
RDX-214ENST00000533678 USP3Q9Y6I4 520 aa17.3■□□□□ 0.36
RDX-214ENST00000533678 SHISA7A6NL88 538 aa17.29■□□□□ 0.36
RDX-214ENST00000533678 SPECC1L-ADORA2AF8WAN1 911 aa17.29■□□□□ 0.36
RDX-214ENST00000533678 LEFTY2O00292 366 aa17.29■□□□□ 0.36
RDX-214ENST00000533678 SLC9A3R1O14745 358 aaPredicted RBP17.29■□□□□ 0.36
RDX-214ENST00000533678 DCNP07585 359 aaKnown RBP17.29■□□□□ 0.36
RDX-214ENST00000533678 MBL2P11226 248 aaPredicted RBP17.29■□□□□ 0.36
RDX-214ENST00000533678 CD19P15391 556 aa17.29■□□□□ 0.36
RDX-214ENST00000533678 CD72P21854 359 aa17.29■□□□□ 0.36
RDX-214ENST00000533678 TARSP26639 723 aaKnown RBP17.29■□□□□ 0.36
RDX-214ENST00000533678 NBL1P41271 181 aa17.29■□□□□ 0.36
RDX-214ENST00000533678 IFNAR2P48551 515 aa17.29■□□□□ 0.36
RDX-214ENST00000533678 BCAT1P54687 386 aa17.29■□□□□ 0.36
RDX-214ENST00000533678 TPM4P67936 248 aa17.29■□□□□ 0.36
RDX-214ENST00000533678 RRAGAQ7L523 313 aa17.29■□□□□ 0.36
RDX-214ENST00000533678 CCDC186Q7Z3E2 898 aa17.29■□□□□ 0.36
RDX-214ENST00000533678 TADA2BQ86TJ2 420 aa17.29■□□□□ 0.36
RDX-214ENST00000533678 ZNF276Q8N554 614 aa17.29■□□□□ 0.36
RDX-214ENST00000533678 ANKRD20A12PQ8NF67 263 aa17.29■□□□□ 0.36
RDX-214ENST00000533678 ATP2A3Q93084 1043 aa17.29■□□□□ 0.36
RDX-214ENST00000533678 TSPAN16Q9UKR8 245 aa17.29■□□□□ 0.36
RDX-214ENST00000533678 CNTN6Q9UQ52 1028 aa17.29■□□□□ 0.36
RDX-214ENST00000533678 MTF2Q9Y483 593 aaPredicted RBP17.29■□□□□ 0.36
RDX-214ENST00000533678 CPQQ9Y646 472 aa17.29■□□□□ 0.36
RDX-214ENST00000533678 SMTNL1A8MU46 457 aa17.28■□□□□ 0.36
RDX-214ENST00000533678 BECN2A8MW95 431 aa17.28■□□□□ 0.36
RDX-214ENST00000533678 PES1O00541 588 aaKnown RBP17.28■□□□□ 0.36
RDX-214ENST00000533678 XPO1O14980 1071 aaKnown RBP17.28■□□□□ 0.36
RDX-214ENST00000533678 COCHO43405 550 aa17.28■□□□□ 0.36
RDX-214ENST00000533678 CDK11BP21127 795 aaKnown RBP17.28■□□□□ 0.36
RDX-214ENST00000533678 EEF1GP26641 437 aaKnown RBP17.28■□□□□ 0.36
RDX-214ENST00000533678 CTHP32929 405 aa17.28■□□□□ 0.36
RDX-214ENST00000533678 MFAP3P55082 362 aa17.28■□□□□ 0.36
RDX-214ENST00000533678 TNK2Q07912 1038 aa17.28■□□□□ 0.36
RDX-214ENST00000533678 BST2Q10589 180 aaKnown RBP17.28■□□□□ 0.36
RDX-214ENST00000533678 NR1H3Q13133 447 aa17.28■□□□□ 0.36
RDX-214ENST00000533678 CNGA2Q16280 664 aa17.28■□□□□ 0.36
RDX-214ENST00000533678 EXOC3L4Q17RC7 722 aa17.28■□□□□ 0.36
RDX-214ENST00000533678 GOLGA7BQ2TAP0 167 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms