RNA–Protein interactions for RNA: ENST00000533674.1

BEST3-207, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 670 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-207ENST00000533674 ALLCQ8N6M5 410 aa9.65□□□□□ -0.86
BEST3-207ENST00000533674 TOP6BLQ8N6T0 577 aa9.65□□□□□ -0.86
BEST3-207ENST00000533674 LRRC52Q8N7C0 313 aa9.65□□□□□ -0.86
BEST3-207ENST00000533674 KDF1Q8NAX2 398 aaPredicted RBP9.65□□□□□ -0.86
BEST3-207ENST00000533674 TXNDC5Q8NBS9 432 aaKnown RBP9.65□□□□□ -0.86
BEST3-207ENST00000533674 HMGB4Q8WW32 186 aa9.65□□□□□ -0.86
BEST3-207ENST00000533674 RLN3Q8WXF3 142 aa9.65□□□□□ -0.86
BEST3-207ENST00000533674 EZH1Q92800 747 aaPredicted RBP9.65□□□□□ -0.86
BEST3-207ENST00000533674 FUBP3Q96I24 572 aaKnown RBP eCLIP9.65□□□□□ -0.86
BEST3-207ENST00000533674 ANKRD36BP1Q96IX9 119 aa9.65□□□□□ -0.86
BEST3-207ENST00000533674 ACCSQ96QU6 501 aa9.65□□□□□ -0.86
BEST3-207ENST00000533674 PNKPQ96T60 521 aa9.65□□□□□ -0.86
BEST3-207ENST00000533674 GTPBP2Q9BX10 602 aaKnown RBP9.65□□□□□ -0.86
BEST3-207ENST00000533674 LINC00597Q9H2U6 94 aa9.65□□□□□ -0.86
BEST3-207ENST00000533674 BLOC1S4Q9NUP1 217 aa9.65□□□□□ -0.86
BEST3-207ENST00000533674 TBC1D7Q9P0N9 293 aa9.65□□□□□ -0.86
BEST3-207ENST00000533674 CCDC39Q9UFE4 941 aa9.65□□□□□ -0.86
BEST3-207ENST00000533674 FKBPLQ9UIM3 349 aa9.65□□□□□ -0.86
BEST3-207ENST00000533674 ARHGAP26Q9UNA1 814 aa9.65□□□□□ -0.86
BEST3-207ENST00000533674 STYXL1Q9Y6J8 313 aa9.65□□□□□ -0.86
BEST3-207ENST00000533674 USP24Q9UPU5 2620 aa9.65□□□□□ -0.87
BEST3-207ENST00000533674 THADAQ6YHU6 1953 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 ATXN2Q99700 1313 aaKnown RBP9.64□□□□□ -0.87
BEST3-207ENST00000533674 TCRBV21S2A2A0A5A6 115 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 K7EQS6 105 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 LEFTY2O00292 366 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 CDX4O14627 284 aaPredicted RBP9.64□□□□□ -0.87
BEST3-207ENST00000533674 HYAL3O43820 417 aaPredicted RBP9.64□□□□□ -0.87
BEST3-207ENST00000533674 TOP3BO95985 862 aaKnown RBP9.64□□□□□ -0.87
BEST3-207ENST00000533674 TNNC2P02585 160 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 GJB2P29033 226 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 TXLNAP40222 546 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 PSMC1P62191 440 aaKnown RBP9.64□□□□□ -0.87
BEST3-207ENST00000533674 SIM1P81133 766 aaPredicted RBP9.64□□□□□ -0.87
BEST3-207ENST00000533674 MRPS21P82921 87 aaKnown RBP9.64□□□□□ -0.87
BEST3-207ENST00000533674 KDSRQ06136 332 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 IFRD2Q12894 506 aaPredicted RBP9.64□□□□□ -0.87
BEST3-207ENST00000533674 NR6A1Q15406 480 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 BTBD8Q5XKL5 378 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 CRELD2Q6UXH1 353 aaPredicted RBP9.64□□□□□ -0.87
BEST3-207ENST00000533674 DENND5BQ6ZUT9 1274 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 HS2ST1Q7LGA3 356 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 ZNF720Q7Z2F6 126 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 FILIP1Q7Z7B0 1213 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 SYT12Q8IV01 421 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 BRSK2Q8IWQ3 736 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 C1orf127Q8N9H9 656 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 MMS19Q96T76 1030 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 SYT15Q9BQS2 421 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 ST6GALNAC4Q9H4F1 302 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 SMPD4Q9NXE4 827 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 SEL1LQ9UBV2 794 aa9.64□□□□□ -0.87
BEST3-207ENST00000533674 EVLQ9UI08 416 aaPredicted RBP9.64□□□□□ -0.87
BEST3-207ENST00000533674 NUP205Q92621 2012 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 GOLGA8IPA6NC78 632 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 GOLGA8JA6NMD2 632 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 SRRM3A6NNA2 597 aaPredicted RBP9.63□□□□□ -0.87
BEST3-207ENST00000533674 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.63□□□□□ -0.87
BEST3-207ENST00000533674 TNFRSF10BO14763 440 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 SCAMP3O14828 347 aaKnown RBP9.63□□□□□ -0.87
BEST3-207ENST00000533674 AP5Z1O43299 807 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 HCRTO43612 131 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 KAT7O95251 611 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 CYP17A1P05093 508 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 MBL2P11226 248 aaPredicted RBP9.63□□□□□ -0.87
BEST3-207ENST00000533674 IDEP14735 1019 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 TCF3P15923 654 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 GAP43P17677 238 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 ENGP17813 658 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 PFKLP17858 780 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 BDNFP23560 247 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 ADSSP30520 456 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 OPRD1P41143 372 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 P2RY2P41231 377 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 MAGEA11P43364 429 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 PPP3CCP48454 512 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 GFPT1Q06210 699 aaPredicted RBP9.63□□□□□ -0.87
BEST3-207ENST00000533674 ARID5BQ14865 1188 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 ACAP1Q15027 740 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 CCDC142Q17RM4 750 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 HSF5Q4G112 596 aaPredicted RBP9.63□□□□□ -0.87
BEST3-207ENST00000533674 PREPLQ4J6C6 727 aaPredicted RBP9.63□□□□□ -0.87
BEST3-207ENST00000533674 L1TD1Q5T7N2 865 aaKnown RBP9.63□□□□□ -0.87
BEST3-207ENST00000533674 ERICH6BQ5W0A0 696 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 VSTM1Q6UX27 236 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 OSTM1Q86WC4 334 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 DDX42Q86XP3 938 aaKnown RBP eCLIP9.63□□□□□ -0.87
BEST3-207ENST00000533674 MYLPFQ96A32 169 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 SPATA17Q96L03 361 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 SLITRK1Q96PX8 696 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 FIZ1Q96SL8 496 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 MTMR12Q9C0I1 747 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 IKZF4Q9H2S9 585 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 SNX25Q9H3E2 840 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 ARHGEF4Q9NR80 690 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 GDAP2Q9NXN4 497 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 GCNT4Q9P109 453 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 CFAP97Q9P2B7 532 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 CDH9Q9ULB4 789 aa9.63□□□□□ -0.87
BEST3-207ENST00000533674 MAP4K5Q9Y4K4 846 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms