RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 ITPKAP23677 461 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 LMO2P25791 158 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 GNL1P36915 607 aaPredicted RBP12.3□□□□□ -0.44
CMTM1-216ENST00000533078 SLC6A11P48066 632 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 TNNC1P63316 161 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 GRIN1Q05586 938 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 KCNA1Q09470 495 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 TAF10Q12962 218 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 SEMA3BQ13214 749 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 CCDC142Q17RM4 750 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 LRSAM1Q6UWE0 723 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 CCDC65Q8IXS2 484 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 OR6B3Q8NGW1 331 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 EPSTI1Q96J88 318 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 TMX3Q96JJ7 454 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 CBWD1Q9BRT8 395 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 STRA6Q9BX79 667 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 CRTAC1Q9NQ79 661 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 SCAMP3O14828 347 aaKnown RBP12.29□□□□□ -0.44
CMTM1-216ENST00000533078 NDUFS2O75306 463 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 OLFM2O95897 454 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 OAS1P00973 400 aaKnown RBP12.29□□□□□ -0.44
CMTM1-216ENST00000533078 HOXB2P14652 356 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 GNSP15586 552 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 TNNI1P19237 187 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 YWHAQP27348 245 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 STAT6P42226 847 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 KIR2DL1P43626 348 aaPredicted RBP12.29□□□□□ -0.44
CMTM1-216ENST00000533078 WNT7BP56706 349 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 USP46P62068 366 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 RING1Q06587 406 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 GAB4Q2WGN9 574 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 ANO4Q32M45 955 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 MAP7D1Q3KQU3 841 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 HECTD3Q5T447 861 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 SYCP2LQ5T4T6 812 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 PEAR1Q5VY43 1037 aaPredicted RBP12.29□□□□□ -0.44
CMTM1-216ENST00000533078 RHBDF2Q6PJF5 856 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 PIP4P1Q86T03 277 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 WDR49Q8IV35 697 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 RGL4Q8IZJ4 473 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 NUP93Q8N1F7 819 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 MINDY1Q8N5J2 469 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 SPRYD3Q8NCJ5 442 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 CXorf38Q8TB03 319 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 KBTBD7Q8WVZ9 684 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 OVCA2Q8WZ82 227 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 FBXO32Q969P5 355 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 KIF2CQ99661 725 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 RNF38Q9H0F5 515 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 FAM124BQ9H5Z6 455 aaPredicted RBP12.29□□□□□ -0.44
CMTM1-216ENST00000533078 UPF2Q9HAU5 1272 aaKnown RBP12.29□□□□□ -0.44
CMTM1-216ENST00000533078 TMEM74BQ9NUR3 256 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 PANK4Q9NVE7 773 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 SUSD2Q9UGT4 822 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 MBD1Q9UIS9 605 aaPredicted RBP12.29□□□□□ -0.44
CMTM1-216ENST00000533078 KLK13Q9UKR3 277 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 CACNA1EQ15878 2313 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 PTPRDP23468 1912 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 PLXND1Q9Y4D7 1925 aa12.29□□□□□ -0.44
CMTM1-216ENST00000533078 MYO18AQ92614 2054 aaKnown RBP12.28□□□□□ -0.44
CMTM1-216ENST00000533078 FASNP49327 2511 aaKnown RBP12.28□□□□□ -0.44
CMTM1-216ENST00000533078 A0A0A0MRY4 1105 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 VPS37CA5D8V6 355 aaPredicted RBP12.28□□□□□ -0.44
CMTM1-216ENST00000533078 ARHGAP33O14559 1287 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 TACC1O75410 805 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 FAM163BP0C2L3 166 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 DLATP10515 647 aaKnown RBP12.28□□□□□ -0.44
CMTM1-216ENST00000533078 HNRNPLP14866 589 aaKnown RBP eCLIP12.28□□□□□ -0.44
CMTM1-216ENST00000533078 TRIM21P19474 475 aaKnown RBP12.28□□□□□ -0.44
CMTM1-216ENST00000533078 NTSR1P30989 418 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 ZXDBP98169 803 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 ZNF33AQ06730 810 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 GOLGA8FQ08AF8 430 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 GOLGA8DPQ0D2H9 430 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 SLC14A1Q13336 389 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 TRPC3Q13507 836 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 LY6G5CQ5SRR4 150 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 C10orf76Q5T2E6 689 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 EMC10Q5UCC4 262 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 ERICH6BQ5W0A0 696 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 CHPFQ8IZ52 775 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 NAT16Q8N8M0 369 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 ZSWIM2Q8NEG5 633 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 SCFD1Q8WVM8 642 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 DNAJC19Q96DA6 116 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 XPO6Q96QU8 1125 aaKnown RBP12.28□□□□□ -0.44
CMTM1-216ENST00000533078 LRRC27Q9C0I9 530 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 CALCOCO1Q9P1Z2 691 aa12.28□□□□□ -0.44
CMTM1-216ENST00000533078 TNRC6BQ9UPQ9 1833 aaKnown RBP12.27□□□□□ -0.44
CMTM1-216ENST00000533078 SMG1Q96Q15 3661 aaKnown RBP12.27□□□□□ -0.44
CMTM1-216ENST00000533078 MYOFQ9NZM1 2061 aa12.27□□□□□ -0.45
CMTM1-216ENST00000533078 A0A1W2PQD8 194 aa12.27□□□□□ -0.45
CMTM1-216ENST00000533078 A8MXQ7 604 aa12.27□□□□□ -0.45
CMTM1-216ENST00000533078 HOXC11O43248 304 aaPredicted RBP12.27□□□□□ -0.45
CMTM1-216ENST00000533078 ADAM23O75077 832 aa12.27□□□□□ -0.45
CMTM1-216ENST00000533078 PTPN1P18031 435 aaKnown RBP12.27□□□□□ -0.45
CMTM1-216ENST00000533078 PDCP20941 246 aa12.27□□□□□ -0.45
CMTM1-216ENST00000533078 CASP5P51878 434 aa12.27□□□□□ -0.45
CMTM1-216ENST00000533078 PLEKHG6Q3KR16 790 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms