RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 SRP72O76094 671 aaKnown RBP11.1□□□□□ -0.63
COLCA1-203ENST00000532918 SEC31AO94979 1220 aaKnown RBP11.1□□□□□ -0.63
COLCA1-203ENST00000532918 KRT8P05787 483 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 FDPSP14324 419 aaKnown RBP11.1□□□□□ -0.63
COLCA1-203ENST00000532918 ZNF135P52742 658 aaPredicted RBP11.1□□□□□ -0.63
COLCA1-203ENST00000532918 FAM110CQ1W6H9 321 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 SUSD6Q92537 303 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 TSPAN18Q96SJ8 248 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 RBM15Q96T37 977 aaKnown RBP eCLIP11.1□□□□□ -0.63
COLCA1-203ENST00000532918 CNPY3Q9BT09 278 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 CLPBQ9H078 707 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 NMRK2Q9NPI5 230 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 DDX4Q9NQI0 724 aaKnown RBP11.1□□□□□ -0.63
COLCA1-203ENST00000532918 TRAV19A0A0A6YYK7 116 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 CBX4O00257 560 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 GYG2O15488 501 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 SPAG7O75391 227 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 IGSF6O95976 241 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 COMTP21964 271 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 PTPN3P26045 913 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 MAF1Q9H063 256 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 ASAH2Q9NR71 780 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 TBC1D13Q9NVG8 400 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 STMN3Q9NZ72 180 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 WARS2Q9UGM6 360 aaKnown RBP11.1□□□□□ -0.63
COLCA1-203ENST00000532918 CYP3A4P08684 503 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 WEE1P30291 646 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 PPIGQ13427 754 aaKnown RBP eCLIP11.1□□□□□ -0.63
COLCA1-203ENST00000532918 FNDC3BQ53EP0 1204 aaKnown RBP11.1□□□□□ -0.63
COLCA1-203ENST00000532918 PPIL6Q8IXY8 311 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 STX19Q8N4C7 294 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 DEFB118Q96PH6 123 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 ERGIC2Q96RQ1 377 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 DNAJC7Q99615 494 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 BRD8Q9H0E9 1235 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 SLC28A3Q9HAS3 691 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 ADA2Q9NZK5 511 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 CDY2AQ9Y6F7 541 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 SMIM10L2AP0DMW4 78 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 SMIM10L2BP0DMW5 78 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 POLR2EP19388 210 aaKnown RBP11.1□□□□□ -0.63
COLCA1-203ENST00000532918 DAB2P98082 770 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 FAM83EQ2M2I3 478 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 ADGRA1Q86SQ6 560 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 FAM9CQ8IZT9 166 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 MYO1HQ8N1T3 1032 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 LZTR1Q8N653 840 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 FAM172AQ8WUF8 416 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 CCDC3Q9BQI4 270 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 CISHQ9NSE2 258 aa11.1□□□□□ -0.63
COLCA1-203ENST00000532918 RBAK-RBAKDNI3L0D1 243 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 MEFVO15553 781 aaPredicted RBP11.09□□□□□ -0.63
COLCA1-203ENST00000532918 CAPZA2P47755 286 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 MYL6P60660 151 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 NCALDP61601 193 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 POU4F1Q01851 419 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 PRKAA1Q13131 559 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 ARL8AQ96BM9 186 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 STAMBPL1Q96FJ0 436 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 FAM167BQ9BTA0 163 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 UBE2OQ9C0C9 1292 aaKnown RBP11.09□□□□□ -0.63
COLCA1-203ENST00000532918 PSMC3IPQ9P2W1 217 aaPredicted RBP11.09□□□□□ -0.63
COLCA1-203ENST00000532918 FAM198AQ9UFP1 575 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 TCRBV5S4A2TA0A5A2 114 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 TADA3O75528 432 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 AKAP5P24588 427 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 SERPINB4P48594 390 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 NDUFV1P49821 464 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 POLR2LP62875 67 aaKnown RBP11.09□□□□□ -0.63
COLCA1-203ENST00000532918 ZNF669Q96BR6 464 aaPredicted RBP11.09□□□□□ -0.63
COLCA1-203ENST00000532918 CELF4Q9BZC1 486 aaKnown RBP11.09□□□□□ -0.63
COLCA1-203ENST00000532918 TMEM134Q9H6X4 195 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 RAD18Q9NS91 495 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 RASSF10A6NK89 507 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 ADGRB1O14514 1584 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 EPB42P16452 691 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 USP41Q3LFD5 358 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 MSL3Q8N5Y2 521 aaKnown RBP11.09□□□□□ -0.63
COLCA1-203ENST00000532918 TRPM4Q8TD43 1214 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 APBB2Q92870 758 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 TMA16Q96EY4 203 aaKnown RBP11.09□□□□□ -0.63
COLCA1-203ENST00000532918 NEURL4Q96JN8 1562 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 INTS13Q9NVM9 706 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 CYP39A1Q9NYL5 469 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 FBXO10Q9UK96 956 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 RPN2P04844 631 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 UBA1P22314 1058 aaKnown RBP11.09□□□□□ -0.63
COLCA1-203ENST00000532918 MAPK1P28482 360 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 RARRES1P49788 294 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 SKP1P63208 163 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 ITGA9Q13797 1035 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 SMTNL2Q2TAL5 461 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 NOMO2Q5JPE7 1267 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 PLPPR4Q7Z2D5 763 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 CBWD1Q9BRT8 395 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 SNX12Q9UMY4 172 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 LZTS1Q9Y250 596 aa11.09□□□□□ -0.63
COLCA1-203ENST00000532918 MRPS23Q9Y3D9 190 aaKnown RBP11.09□□□□□ -0.63
COLCA1-203ENST00000532918 DYTNA2CJ06 578 aa11.08□□□□□ -0.63
COLCA1-203ENST00000532918 IL10P22301 178 aa11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms