RNA–Protein interactions for RNA: ENST00000532581.5

GRAMD1B-208, Transcript of GRAM domain containing 1B, humanhuman

TSL 2

Gene GRAMD1B, Length 2,615 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-208ENST00000532581 CNTN2Q02246 1040 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 APBB1IPQ7Z5R6 666 aaPredicted RBP13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 TRIM42Q8IWZ5 723 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 VPS52Q8N1B4 723 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 APBB2Q92870 758 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 FAF2Q96CS3 445 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 SRPK1Q96SB4 655 aaKnown RBP13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 PTPRHQ9HD43 1115 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 PAK5Q9P286 719 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 TTLL3Q9Y4R7 772 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 KRT37O76014 449 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 MICAL2O94851 1124 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 C1QAP02745 245 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 MYL2P10916 166 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 ESRRAP11474 423 aaPredicted RBP13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 TCF7P36402 384 aaPredicted RBP13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 HIRAP54198 1017 aaPredicted RBP13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 YWHAZP63104 245 aaKnown RBP13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 PTPN11Q06124 597 aaPredicted RBP13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 GRIK3Q13003 919 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 CCDC6Q16204 474 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 NPNTQ6UXI9 565 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 ZC3H18Q86VM9 953 aaKnown RBP13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 JDP2Q8WYK2 163 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 PRR11Q96HE9 360 aaPredicted RBP13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 ZNF333Q96JL9 665 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 PEBP4Q96S96 227 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 ADPGKQ9BRR6 497 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 SLC24A3Q9HC58 644 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 NMRK1Q9NWW6 199 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 STK32BQ9NY57 414 aa13.64□□□□□ -0.23
GRAMD1B-208ENST00000532581 FCHO1O14526 889 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 IL18RAPO95256 599 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 KRT19P08727 400 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 RARBP10826 455 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 CDH6P55285 790 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 MMRN1Q13201 1228 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 KPNB1Q14974 876 aaKnown RBP13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 RCN1Q15293 331 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 ACSBG2Q5FVE4 666 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 RINLQ6ZS11 566 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 APLFQ8IW19 511 aaPredicted RBP13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 EXOC8Q8IYI6 725 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 ARHGAP24Q8N264 748 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 SEPT1Q8WYJ6 367 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 RTP4Q96DX8 246 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 CFAP36Q96G28 342 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 C7orf26Q96N11 449 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 CNPY3Q9BT09 278 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 SDCBP2Q9H190 292 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 MKS1Q9NXB0 559 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 KCNK4Q9NYG8 393 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 TAS2R1Q9NYW7 299 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 SIX4Q9UIU6 781 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 TRIM49D1C9J1S8 452 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 H7C0C1 242 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 I3L4J1 428 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 M0QYV0 167 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 ACKR2O00590 384 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 SNRPAP09012 282 aaKnown RBP13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 LINGO3P0C6S8 592 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 ATP5OP48047 213 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 CDH8P55286 799 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 OCRLQ01968 901 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 FAM102AQ5T9C2 384 aaPredicted RBP13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 ATF7IP2Q5U623 682 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 ANGEL2Q5VTE6 544 aaKnown RBP13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 CYP4V2Q6ZWL3 525 aaPredicted RBP13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 PRPF39Q86UA1 669 aaKnown RBP13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 RAB6BQ9NRW1 208 aa13.63□□□□□ -0.23
GRAMD1B-208ENST00000532581 IGKV6-21A0A0C4DH24 114 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 TRDMT1O14717 391 aaKnown RBP13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 CILPO75339 1184 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 PSMG1O95456 288 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 HMGCRP04035 888 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 ANK1P16157 1881 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 GPD1P21695 349 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 EDNRBP24530 442 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 CCNFP41002 786 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 IRX1P78414 480 aaPredicted RBP13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 KLC1Q07866 573 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 LGSNQ5TDP6 509 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 METTL7BQ6UX53 244 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 PPM1NQ8N819 430 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 TMEM176AQ96HP8 235 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 TWNKQ96RR1 684 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 ELOVL4Q9GZR5 314 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 SMYD3Q9H7B4 428 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 USP29Q9HBJ7 922 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 PLLPQ9Y342 182 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 AFG3L2Q9Y4W6 797 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 A8MXQ7 604 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 AVILO75366 819 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 KRT36O76013 467 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 PRKCHP24723 683 aa13.62□□□□□ -0.23
GRAMD1B-208ENST00000532581 GPD2P43304 727 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms