RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 FOXJ1Q92949 421 aa8.85□□□□□ -0.99
CD44-232ENST00000531118 KCNB2Q92953 911 aa8.85□□□□□ -0.99
CD44-232ENST00000531118 MTMR9Q96QG7 549 aa8.85□□□□□ -0.99
CD44-232ENST00000531118 CYP2S1Q96SQ9 504 aa8.85□□□□□ -0.99
CD44-232ENST00000531118 PNKPQ96T60 521 aa8.85□□□□□ -0.99
CD44-232ENST00000531118 KIF2CQ99661 725 aa8.85□□□□□ -0.99
CD44-232ENST00000531118 ARHGAP9Q9BRR9 750 aa8.85□□□□□ -0.99
CD44-232ENST00000531118 GAREM1Q9H706 876 aa8.85□□□□□ -0.99
CD44-232ENST00000531118 PLEKHA5Q9HAU0 1116 aa8.85□□□□□ -0.99
CD44-232ENST00000531118 ARHGEF4Q9NR80 690 aa8.85□□□□□ -0.99
CD44-232ENST00000531118 TMLHEQ9NVH6 421 aa8.85□□□□□ -0.99
CD44-232ENST00000531118 BTBD3Q9Y2F9 522 aa8.85□□□□□ -0.99
CD44-232ENST00000531118 PCDHB5Q9Y5E4 795 aa8.85□□□□□ -0.99
CD44-232ENST00000531118 SNX14Q9Y5W7 946 aa8.85□□□□□ -0.99
CD44-232ENST00000531118 CKAP5Q14008 2032 aa8.85□□□□□ -0.99
CD44-232ENST00000531118 NUMA1Q14980 2115 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 AHCTF1Q8WYP5 2266 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 A0A1B0GTW7 788 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 MYMKA6NI61 221 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.84□□□□□ -0.99
CD44-232ENST00000531118 LEFTY2O00292 366 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 RRP8O43159 456 aaKnown RBP8.84□□□□□ -0.99
CD44-232ENST00000531118 ZNF217O75362 1048 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 PRPF40AO75400 957 aaKnown RBP8.84□□□□□ -0.99
CD44-232ENST00000531118 WISP1O95388 367 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 XBP1P17861 261 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 RPA1P27694 616 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 KRT2P35908 639 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 TNFSF9P41273 254 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 GRIA2P42262 883 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 BNC1Q01954 994 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 MCL1Q07820 350 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 DHCR24Q15392 516 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 SAFBQ15424 915 aaKnown RBP eCLIP8.84□□□□□ -0.99
CD44-232ENST00000531118 TAF1BQ53T94 588 aaPredicted RBP8.84□□□□□ -0.99
CD44-232ENST00000531118 SYCP2LQ5T4T6 812 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 CPLX2Q6PUV4 134 aaKnown RBP8.84□□□□□ -0.99
CD44-232ENST00000531118 DHRS13Q6UX07 377 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 FILIP1Q7Z7B0 1213 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 ZNF513Q8N8E2 541 aaPredicted RBP8.84□□□□□ -0.99
CD44-232ENST00000531118 FAM174AQ8TBP5 190 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 LEO1Q8WVC0 666 aaPredicted RBP8.84□□□□□ -0.99
CD44-232ENST00000531118 ZNF419Q96HQ0 510 aaPredicted RBP8.84□□□□□ -0.99
CD44-232ENST00000531118 TEP1Q99973 2627 aaKnown RBP8.84□□□□□ -0.99
CD44-232ENST00000531118 C1QTNF2Q9BXJ5 285 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 SEMA4CQ9C0C4 833 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 TMEM60Q9H2L4 133 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 BHMT2Q9H2M3 363 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 KMT5AQ9NQR1 393 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 DSEQ9UL01 958 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 PCDHGB2Q9Y5G2 931 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 LRRK2Q5S007 2527 aa8.84□□□□□ -0.99
CD44-232ENST00000531118 TEX15Q9BXT5 2789 aa8.84□□□□□ -1
CD44-232ENST00000531118 BSNQ9UPA5 3926 aa8.83□□□□□ -1
CD44-232ENST00000531118 UBR5O95071 2799 aaPredicted RBP8.83□□□□□ -1
CD44-232ENST00000531118 A0A1W2PQF6 199 aa8.83□□□□□ -1
CD44-232ENST00000531118 BTBD18B2RXH4 712 aa8.83□□□□□ -1
CD44-232ENST00000531118 SCAMP3O14828 347 aaKnown RBP8.83□□□□□ -1
CD44-232ENST00000531118 SLC16A4O15374 487 aa8.83□□□□□ -1
CD44-232ENST00000531118 TNFSF14O43557 240 aa8.83□□□□□ -1
CD44-232ENST00000531118 HIP1RO75146 1068 aa8.83□□□□□ -1
CD44-232ENST00000531118 NDUFS2O75306 463 aa8.83□□□□□ -1
CD44-232ENST00000531118 ADH1CP00326 375 aa8.83□□□□□ -1
CD44-232ENST00000531118 CLTAP09496 248 aa8.83□□□□□ -1
CD44-232ENST00000531118 ADH5P11766 374 aa8.83□□□□□ -1
CD44-232ENST00000531118 PAX3P23760 479 aa8.83□□□□□ -1
CD44-232ENST00000531118 MAOBP27338 520 aa8.83□□□□□ -1
CD44-232ENST00000531118 TNFRSF4P43489 277 aa8.83□□□□□ -1
CD44-232ENST00000531118 CXADRP78310 365 aa8.83□□□□□ -1
CD44-232ENST00000531118 ZXDBP98169 803 aa8.83□□□□□ -1
CD44-232ENST00000531118 ATP2C1P98194 919 aaPredicted RBP8.83□□□□□ -1
CD44-232ENST00000531118 SEMG2Q02383 582 aa8.83□□□□□ -1
CD44-232ENST00000531118 TLE3Q04726 772 aa8.83□□□□□ -1
CD44-232ENST00000531118 MAPK7Q13164 816 aa8.83□□□□□ -1
CD44-232ENST00000531118 STK3Q13188 491 aa8.83□□□□□ -1
CD44-232ENST00000531118 DDR2Q16832 855 aa8.83□□□□□ -1
CD44-232ENST00000531118 CCDC157Q569K6 752 aa8.83□□□□□ -1
CD44-232ENST00000531118 C6orf118Q5T5N4 469 aa8.83□□□□□ -1
CD44-232ENST00000531118 SPATA1Q5VX52 437 aa8.83□□□□□ -1
CD44-232ENST00000531118 C9orf57Q5W0N0 161 aa8.83□□□□□ -1
CD44-232ENST00000531118 HAUS3Q68CZ6 603 aa8.83□□□□□ -1
CD44-232ENST00000531118 METTL23Q86XA0 190 aa8.83□□□□□ -1
CD44-232ENST00000531118 DCP1BQ8IZD4 617 aaKnown RBP8.83□□□□□ -1
CD44-232ENST00000531118 THEM5Q8N1Q8 247 aa8.83□□□□□ -1
CD44-232ENST00000531118 ERMNQ8TAM6 284 aa8.83□□□□□ -1
CD44-232ENST00000531118 RHBDD1Q8TEB9 315 aa8.83□□□□□ -1
CD44-232ENST00000531118 ZNF592Q92610 1267 aa8.83□□□□□ -1
CD44-232ENST00000531118 MRGPRX2Q96LB1 330 aa8.83□□□□□ -1
CD44-232ENST00000531118 MYRFLQ96LU7 910 aa8.83□□□□□ -1
CD44-232ENST00000531118 DRC1Q96MC2 740 aa8.83□□□□□ -1
CD44-232ENST00000531118 HAPLN2Q9GZV7 340 aa8.83□□□□□ -1
CD44-232ENST00000531118 GDPD2Q9HCC8 539 aa8.83□□□□□ -1
CD44-232ENST00000531118 CD248Q9HCU0 757 aa8.83□□□□□ -1
CD44-232ENST00000531118 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.83□□□□□ -1
CD44-232ENST00000531118 A0A0A0MRY4 1105 aa8.82□□□□□ -1
CD44-232ENST00000531118 LACTBL1A8MY62 500 aa8.82□□□□□ -1
CD44-232ENST00000531118 SLC28A2O43868 658 aa8.82□□□□□ -1
CD44-232ENST00000531118 FAM189A1O60320 539 aa8.82□□□□□ -1
CD44-232ENST00000531118 CDKL5O76039 1030 aa8.82□□□□□ -1
CD44-232ENST00000531118 NFICP08651 508 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms