RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 PDPRQ8NCN5 879 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 CEP44Q9C0F1 390 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 UGT1A7Q9HAW7 530 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 UGT1A10Q9HAW8 530 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 UGT1A8Q9HAW9 530 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 OLFML3Q9NRN5 406 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 BMP2KQ9NSY1 1161 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-214ENST00000530886 TMEM9Q9P0T7 183 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 ANKMY1Q9P2S6 941 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 SLC8A2Q9UPR5 921 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 RNF11Q9Y3C5 154 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 ASTN1O14525 1302 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 GSTTP1A0A1W2PQM5 241 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 PRR5-ARHGAP8B1AHC4 643 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 POC1B-GALNT4F8VUJ3 575 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 PSMD12O00232 456 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-214ENST00000530886 DNALI1O14645 258 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-214ENST00000530886 AKAP3O75969 853 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 EEF2P13639 858 aaKnown RBP8.44□□□□□ -1.06
CSDE1-214ENST00000530886 P4HA1P13674 534 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 CCDC130P13994 396 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 PSMC3P17980 439 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 L1CAMP32004 1257 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 CABP4P57796 275 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 ARHGAP8P85298 464 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 DRAP1Q14919 205 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-214ENST00000530886 SUZ12Q15022 739 aaKnown RBP8.44□□□□□ -1.06
CSDE1-214ENST00000530886 ACAP1Q15027 740 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 TRIP13Q15645 432 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-214ENST00000530886 FAM47AQ5JRC9 791 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 SLX4IPQ5VYV7 408 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 ITPRIPL1Q6GPH6 555 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 OGFOD2Q6N063 350 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 GPR141Q7Z602 305 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 ZNF354CQ86Y25 554 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 RAPGEF4Q8WZA2 1011 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 TAMM41Q96BW9 452 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 ORAI2Q96SN7 254 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 SAYSD1Q9NPB0 183 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 DCP1AQ9NPI6 582 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-214ENST00000530886 PNPLA3Q9NST1 481 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 HOXC10Q9NYD6 342 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 VPS28Q9UK41 221 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 SATB2Q9UPW6 733 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 MYRFQ9Y2G1 1151 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 MAGEB6P1A0A0J9YX57 407 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 ESYT2A0FGR8 921 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 POTEMA6NI47 508 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 GOLGA8CPA6NN73 597 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 TBKBP1A7MCY6 615 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 CLDN3O15551 220 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 MYCLP1P12525 358 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-214ENST00000530886 SLC12A3P55017 1021 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 CHRNEQ04844 493 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 KLHL38Q2WGJ6 581 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 TEX44Q53QW1 395 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 KRT79Q5XKE5 535 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 ANGPTL6Q8NI99 470 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 ETNPPLQ8TBG4 499 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 CALML6Q8TD86 181 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 SNX29Q8TEQ0 813 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 ZNF597Q96LX8 424 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 GCOM2Q9BZD3 368 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-214ENST00000530886 RPF2Q9H7B2 306 aaKnown RBP8.44□□□□□ -1.06
CSDE1-214ENST00000530886 PARVGQ9HBI0 331 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 SEPT3Q9UH03 358 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 EBF1Q9UH73 591 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 EMSYQ7Z589 1322 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 KDM3AQ9Y4C1 1321 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 A0A0B4J269 797 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 ARHGAP42A6NI28 874 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 WTIPA6NIX2 430 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-214ENST00000530886 E5RJQ4 531 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 SNNO75324 88 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-214ENST00000530886 GCATO75600 419 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 GNL1P36915 607 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-214ENST00000530886 NDST2P52849 883 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 CDKL1Q00532 357 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 CTBSQ01459 385 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 PDIA2Q13087 525 aaKnown RBP8.44□□□□□ -1.06
CSDE1-214ENST00000530886 TUBB3Q13509 450 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 DPYSQ14117 519 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 MORF4L2Q15014 288 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 CYP2A13Q16696 494 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 KNOP1Q1ED39 458 aaKnown RBP8.44□□□□□ -1.06
CSDE1-214ENST00000530886 CYP4F22Q6NT55 531 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 LYSMD3Q7Z3D4 306 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 SHKBP1Q8TBC3 707 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 DCAKDQ8WVC6 231 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 THAP11Q96EK4 314 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 KCNK16Q96T55 309 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 FERMT1Q9BQL6 677 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 MKS1Q9NXB0 559 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 DNAJC12Q9UKB3 198 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 AP4S1Q9Y587 144 aa8.44□□□□□ -1.06
CSDE1-214ENST00000530886 C2orf71A6NGG8 1288 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 CFAP99D6REC4 459 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 STAM2O75886 525 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 MYL4P12829 197 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 TCEA1P23193 301 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms