RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 FNTBP49356 437 aa20.41■□□□□ 0.86
CAPN1-211ENST00000527739 MXI1P50539 228 aa20.41■□□□□ 0.86
CAPN1-211ENST00000527739 SLC7A9P82251 487 aa20.41■□□□□ 0.86
CAPN1-211ENST00000527739 ZXDBP98169 803 aa20.41■□□□□ 0.86
CAPN1-211ENST00000527739 FKBP3Q00688 224 aaKnown RBP20.41■□□□□ 0.86
CAPN1-211ENST00000527739 STIM1Q13586 685 aa20.41■□□□□ 0.86
CAPN1-211ENST00000527739 ZNF394Q53GI3 561 aa20.41■□□□□ 0.86
CAPN1-211ENST00000527739 HECTD3Q5T447 861 aa20.41■□□□□ 0.86
CAPN1-211ENST00000527739 CYFIP2Q96F07 1278 aa20.41■□□□□ 0.86
CAPN1-211ENST00000527739 C2orf42Q9NWW7 574 aa20.41■□□□□ 0.86
CAPN1-211ENST00000527739 GMIPQ9P107 970 aa20.41■□□□□ 0.86
CAPN1-211ENST00000527739 RAB23Q9ULC3 237 aa20.41■□□□□ 0.86
CAPN1-211ENST00000527739 SMG5Q9UPR3 1016 aaKnown RBP20.41■□□□□ 0.86
CAPN1-211ENST00000527739 TNFRSF10BO14763 440 aa20.4■□□□□ 0.86
CAPN1-211ENST00000527739 OAS1P00973 400 aaKnown RBP20.4■□□□□ 0.86
CAPN1-211ENST00000527739 TDGF1P13385 188 aa20.4■□□□□ 0.86
CAPN1-211ENST00000527739 DRD1P21728 446 aa20.4■□□□□ 0.86
CAPN1-211ENST00000527739 PMS1P54277 932 aaKnown RBP20.4■□□□□ 0.86
CAPN1-211ENST00000527739 DMWDQ09019 674 aa20.4■□□□□ 0.86
CAPN1-211ENST00000527739 LPAL2Q16609 132 aa20.4■□□□□ 0.86
CAPN1-211ENST00000527739 PRR23BQ6ZRT6 265 aa20.4■□□□□ 0.86
CAPN1-211ENST00000527739 FILIP1Q7Z7B0 1213 aa20.4■□□□□ 0.86
CAPN1-211ENST00000527739 FBXL13Q8NEE6 735 aa20.4■□□□□ 0.86
CAPN1-211ENST00000527739 ZMIZ2Q8NF64 920 aa20.4■□□□□ 0.86
CAPN1-211ENST00000527739 OVCA2Q8WZ82 227 aa20.4■□□□□ 0.86
CAPN1-211ENST00000527739 SEMA4DQ92854 862 aa20.4■□□□□ 0.86
CAPN1-211ENST00000527739 CD101Q93033 1021 aa20.4■□□□□ 0.86
CAPN1-211ENST00000527739 SECISBP2LQ93073 1101 aaKnown RBP20.4■□□□□ 0.86
CAPN1-211ENST00000527739 HEXIM2Q96MH2 286 aaKnown RBP20.4■□□□□ 0.86
CAPN1-211ENST00000527739 GTPBP4Q9BZE4 634 aaKnown RBP20.4■□□□□ 0.86
CAPN1-211ENST00000527739 EPC1Q9H2F5 836 aa20.4■□□□□ 0.86
CAPN1-211ENST00000527739 COMMD8Q9NX08 183 aa20.4■□□□□ 0.86
CAPN1-211ENST00000527739 RAB20Q9NX57 234 aa20.4■□□□□ 0.86
CAPN1-211ENST00000527739 NCOR2Q9Y618 2525 aa20.4■□□□□ 0.86
CAPN1-211ENST00000527739 TRIM49BA6NDI0 452 aa20.39■□□□□ 0.85
CAPN1-211ENST00000527739 COCHO43405 550 aa20.39■□□□□ 0.85
CAPN1-211ENST00000527739 ATG13O75143 517 aa20.39■□□□□ 0.85
CAPN1-211ENST00000527739 RNF40O75150 1001 aa20.39■□□□□ 0.85
CAPN1-211ENST00000527739 TCF3P15923 654 aa20.39■□□□□ 0.85
CAPN1-211ENST00000527739 INCA1Q0VD86 236 aa20.39■□□□□ 0.85
CAPN1-211ENST00000527739 DDX42Q86XP3 938 aaKnown RBP eCLIP20.39■□□□□ 0.85
CAPN1-211ENST00000527739 HNRNPABQ99729 332 aaKnown RBP20.39■□□□□ 0.85
CAPN1-211ENST00000527739 FBXO44Q9H4M3 255 aa20.39■□□□□ 0.85
CAPN1-211ENST00000527739 CCSER2Q9H7U1 834 aa20.39■□□□□ 0.85
CAPN1-211ENST00000527739 SLC8A2Q9UPR5 921 aa20.39■□□□□ 0.85
CAPN1-211ENST00000527739 SLC9A3R1O14745 358 aaPredicted RBP20.38■□□□□ 0.85
CAPN1-211ENST00000527739 PSMA7O14818 248 aa20.38■□□□□ 0.85
CAPN1-211ENST00000527739 SLC16A3O15427 465 aaKnown RBP20.38■□□□□ 0.85
CAPN1-211ENST00000527739 CILPO75339 1184 aa20.38■□□□□ 0.85
CAPN1-211ENST00000527739 COBLL1Q53SF7 1204 aa20.38■□□□□ 0.85
CAPN1-211ENST00000527739 KLHL10Q6JEL2 608 aa20.38■□□□□ 0.85
CAPN1-211ENST00000527739 PKN3Q6P5Z2 889 aa20.38■□□□□ 0.85
CAPN1-211ENST00000527739 SPATA20Q8TB22 786 aa20.38■□□□□ 0.85
CAPN1-211ENST00000527739 WHAMMQ8TF30 809 aa20.38■□□□□ 0.85
CAPN1-211ENST00000527739 MAN1B1Q9UKM7 699 aa20.38■□□□□ 0.85
CAPN1-211ENST00000527739 SH3BP1Q9Y3L3 701 aa20.38■□□□□ 0.85
CAPN1-211ENST00000527739 K7ESF4 209 aa20.37■□□□□ 0.85
CAPN1-211ENST00000527739 GADD45BO75293 160 aaPredicted RBP20.37■□□□□ 0.85
CAPN1-211ENST00000527739 OLFM2O95897 454 aa20.37■□□□□ 0.85
CAPN1-211ENST00000527739 ACO1P21399 889 aaKnown RBP20.37■□□□□ 0.85
CAPN1-211ENST00000527739 TGM1P22735 817 aa20.37■□□□□ 0.85
CAPN1-211ENST00000527739 HOXC13P31276 330 aa20.37■□□□□ 0.85
CAPN1-211ENST00000527739 PXNP49023 591 aaPredicted RBP20.37■□□□□ 0.85
CAPN1-211ENST00000527739 LRRC63Q05C16 580 aa20.37■□□□□ 0.85
CAPN1-211ENST00000527739 LONP2Q86WA8 852 aa20.37■□□□□ 0.85
CAPN1-211ENST00000527739 ADGRG2Q8IZP9 1017 aa20.37■□□□□ 0.85
CAPN1-211ENST00000527739 TATDN2Q93075 761 aa20.37■□□□□ 0.85
CAPN1-211ENST00000527739 CSNK1G1Q9HCP0 422 aa20.37■□□□□ 0.85
CAPN1-211ENST00000527739 TLR8Q9NR97 1041 aaKnown RBP20.37■□□□□ 0.85
CAPN1-211ENST00000527739 CISHQ9NSE2 258 aa20.37■□□□□ 0.85
CAPN1-211ENST00000527739 IL37Q9NZH6 218 aa20.37■□□□□ 0.85
CAPN1-211ENST00000527739 ARMCX3Q9UH62 379 aaPredicted RBP20.37■□□□□ 0.85
CAPN1-211ENST00000527739 BIN1O00499 593 aa20.36■□□□□ 0.85
CAPN1-211ENST00000527739 IRF1P10914 325 aa20.36■□□□□ 0.85
CAPN1-211ENST00000527739 SRSF5Q13243 272 aaKnown RBP20.36■□□□□ 0.85
CAPN1-211ENST00000527739 SIM2Q14190 667 aaPredicted RBP20.36■□□□□ 0.85
CAPN1-211ENST00000527739 CCDC40Q4G0X9 1142 aa20.36■□□□□ 0.85
CAPN1-211ENST00000527739 FBXO43Q4G163 708 aa20.36■□□□□ 0.85
CAPN1-211ENST00000527739 CBWD6Q4V339 395 aa20.36■□□□□ 0.85
CAPN1-211ENST00000527739 CBWD3Q5JTY5 395 aa20.36■□□□□ 0.85
CAPN1-211ENST00000527739 CBWD5Q5RIA9 395 aa20.36■□□□□ 0.85
CAPN1-211ENST00000527739 CLEC20AQ6ZU45 233 aa20.36■□□□□ 0.85
CAPN1-211ENST00000527739 CEP68Q76N32 757 aa20.36■□□□□ 0.85
CAPN1-211ENST00000527739 GPRIN1Q7Z2K8 1008 aa20.36■□□□□ 0.85
CAPN1-211ENST00000527739 RPLP0P6Q8NHW5 317 aa20.36■□□□□ 0.85
CAPN1-211ENST00000527739 DHTKD1Q96HY7 919 aaPredicted RBP20.36■□□□□ 0.85
CAPN1-211ENST00000527739 PARD6AQ9NPB6 346 aa20.36■□□□□ 0.85
CAPN1-211ENST00000527739 POLR3BQ9NW08 1133 aaPredicted RBP20.36■□□□□ 0.85
CAPN1-211ENST00000527739 GMEB2Q9UKD1 530 aa20.36■□□□□ 0.85
CAPN1-211ENST00000527739 HRO43593 1189 aa20.35■□□□□ 0.85
CAPN1-211ENST00000527739 PAPSS2O95340 614 aaPredicted RBP20.35■□□□□ 0.85
CAPN1-211ENST00000527739 CYP17A1P05093 508 aa20.35■□□□□ 0.85
CAPN1-211ENST00000527739 ATXN1P54253 815 aaKnown RBP20.35■□□□□ 0.85
CAPN1-211ENST00000527739 SEC13P55735 322 aa20.35■□□□□ 0.85
CAPN1-211ENST00000527739 LRMPQ12912 555 aa20.35■□□□□ 0.85
CAPN1-211ENST00000527739 DHCR24Q15392 516 aa20.35■□□□□ 0.85
CAPN1-211ENST00000527739 PPP1R26Q5T8A7 1209 aaPredicted RBP20.35■□□□□ 0.85
CAPN1-211ENST00000527739 SNX30Q5VWJ9 437 aa20.35■□□□□ 0.85
CAPN1-211ENST00000527739 TTC39CQ8N584 583 aa20.35■□□□□ 0.85
CAPN1-211ENST00000527739 TMEM176AQ96HP8 235 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms