RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 STX1BP61266 288 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 GFPT1Q06210 699 aaPredicted RBP6.05□□□□□ -1.44
CD44-225ENST00000527326 KLRC3Q07444 240 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 EHHADHQ08426 723 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 TRIM28Q13263 835 aaKnown RBP6.05□□□□□ -1.44
CD44-225ENST00000527326 NFE2L1Q14494 772 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 SLC29A2Q14542 456 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 HIF1AQ16665 826 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 DCAF6Q58WW2 860 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 XP32Q5T750 250 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 DUPD1Q68J44 220 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 STOX1Q6ZVD7 989 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 KRT26Q7Z3Y9 468 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 TMEM126BQ8IUX1 230 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 ZSCAN29Q8IWY8 852 aaPredicted RBP6.05□□□□□ -1.44
CD44-225ENST00000527326 GRAMD1CQ8IYS0 662 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 ANKRD35Q8N283 1001 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 LILRB2Q8N423 598 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 AFAP1L2Q8N4X5 818 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 ANKRD42Q8N9B4 389 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 NPLOC4Q8TAT6 608 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 EPS8L3Q8TE67 593 aaKnown RBP6.05□□□□□ -1.44
CD44-225ENST00000527326 PPP4R1Q8TF05 950 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 SYN2Q92777 582 aaPredicted RBP6.05□□□□□ -1.44
CD44-225ENST00000527326 RPGRQ92834 1020 aaKnown RBP6.05□□□□□ -1.44
CD44-225ENST00000527326 TAMM41Q96BW9 452 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 CFAP36Q96G28 342 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 TTC25Q96NG3 672 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 VPS35Q96QK1 796 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 YME1L1Q96TA2 773 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 C17orf80Q9BSJ5 609 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 NUP85Q9BW27 656 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 LRRC2Q9BYS8 371 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 OSBPL8Q9BZF1 889 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 RNF38Q9H0F5 515 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 KLHL25Q9H0H3 589 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 SIAEQ9HAT2 523 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 S100A14Q9HCY8 104 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 C9orf78Q9NZ63 289 aaPredicted RBP6.05□□□□□ -1.44
CD44-225ENST00000527326 GPRC5DQ9NZD1 345 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 ARHGAP20Q9P2F6 1191 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 LGALS13Q9UHV8 139 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 ACAD8Q9UKU7 415 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 PHTF1Q9UMS5 762 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 ERGIC3Q9Y282 383 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 PCDHB6Q9Y5E3 794 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 MROH1Q8NDA8 1641 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 PTPRUQ92729 1446 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 NRKQ7Z2Y5 1582 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 DDX60Q8IY21 1712 aaKnown RBP6.05□□□□□ -1.44
CD44-225ENST00000527326 ABCB11O95342 1321 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 RPTORQ8N122 1335 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.04□□□□□ -1.44
CD44-225ENST00000527326 EVPLLA8MZ36 301 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 E7EWF7 191 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 PODXLO00592 558 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 POLR1CO15160 346 aaPredicted RBP6.04□□□□□ -1.44
CD44-225ENST00000527326 ACOX3O15254 700 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 PTCD1O75127 700 aaKnown RBP6.04□□□□□ -1.44
CD44-225ENST00000527326 TM7SF2O76062 418 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 SEC24DO94855 1032 aaPredicted RBP6.04□□□□□ -1.44
CD44-225ENST00000527326 MAP3K6O95382 1288 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 TTLL1O95922 423 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 FTCDO95954 541 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 ATP5BP06576 529 aaKnown RBP6.04□□□□□ -1.44
CD44-225ENST00000527326 INHBBP09529 407 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 RARBP10826 455 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 CCDC130P13994 396 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 PDE6AP16499 860 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 HSPA6P17066 643 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 VAMP1P23763 118 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 TTKP33981 857 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 PTGS2P35354 604 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 STT3AP46977 705 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 SLC5A3P53794 718 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 NCKAP1LP55160 1127 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 PTENP60484 403 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 ESRRGP62508 458 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 OLR1P78380 273 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 IFIT5Q13325 482 aaKnown RBP6.04□□□□□ -1.44
CD44-225ENST00000527326 SNAPC2Q13487 334 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 ATP1A4Q13733 1029 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 SPARCL1Q14515 664 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 PSMD6Q15008 389 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 OXA1LQ15070 435 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 UBE3CQ15386 1083 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 NPTX1Q15818 432 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 SLC15A2Q16348 729 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 GRIK5Q16478 980 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 GPR162Q16538 588 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 MAPK6Q16659 721 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 DGKDQ16760 1214 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 TXNRD1Q16881 649 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 ASTE1Q2TB18 679 aaPredicted RBP6.04□□□□□ -1.44
CD44-225ENST00000527326 CCDC58Q4VC31 144 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 SFT2D3Q587I9 215 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 LMBRD2Q68DH5 695 aaPredicted RBP6.04□□□□□ -1.44
CD44-225ENST00000527326 SCARA3Q6AZY7 606 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 MPRIPQ6WCQ1 1025 aa6.04□□□□□ -1.44
CD44-225ENST00000527326 RAPH1Q70E73 1250 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms