RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 MGRN1O60291 552 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 MMP3P08254 477 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 PHBP35232 272 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 ATP11AP98196 1134 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 DNAJC3Q13217 504 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 SPARCL1Q14515 664 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 KIZQ2M2Z5 673 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 RNF43Q68DV7 783 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 DARS2Q6PI48 645 aaKnown RBP18.35■□□□□ 0.53
USH1C-205ENST00000527020 ZNF410Q86VK4 478 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 ECHDC2Q86YB7 292 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 PQLC3Q8N755 202 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 DCAKDQ8WVC6 231 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 SLC4A5Q9BY07 1137 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 ADAMTS10Q9H324 1103 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 SNTG2Q9NY99 539 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 VGLL3A8MV65 326 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 FGFR1P11362 822 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 CA4P22748 312 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 STIP1P31948 543 aaKnown RBP18.34■□□□□ 0.53
USH1C-205ENST00000527020 MNAT1P51948 309 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 RNASELQ05823 741 aaKnown RBP18.34■□□□□ 0.53
USH1C-205ENST00000527020 ACVR2BQ13705 512 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 ZBTB6Q15916 424 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 PDK4Q16654 411 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 ZC3H12AQ5D1E8 599 aaKnown RBP18.34■□□□□ 0.53
USH1C-205ENST00000527020 C1orf228Q6PIY5 440 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 PDIK1LQ8N165 341 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 AGGF1Q8N302 714 aaeCLIP18.34■□□□□ 0.53
USH1C-205ENST00000527020 PLD5Q8N7P1 536 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 CCDC63Q8NA47 563 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 GRAMD1AQ96CP6 724 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 SLC10A4Q96EP9 437 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 RXFP1Q9HBX9 757 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 CD248Q9HCU0 757 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 SSU72Q9NP77 194 aaKnown RBP18.34■□□□□ 0.53
USH1C-205ENST00000527020 FAM49BQ9NUQ9 324 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 TUBGCP4Q9UGJ1 667 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 GJD2Q9UKL4 321 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 SNX9Q9Y5X1 595 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 ADCY6O43306 1168 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 YBX3P16989 372 aaKnown RBP eCLIP18.34■□□□□ 0.53
USH1C-205ENST00000527020 KRT4P19013 534 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 TMEM62Q0P6H9 643 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 TFDP2Q14188 446 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 STILQ15468 1287 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 CA9Q16790 459 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 DCAF4L1Q3SXM0 396 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 FAM47CQ5HY64 1035 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 TMEM110Q86TL2 294 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 SLC35F5Q8WV83 523 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 MS4A4AQ96JQ5 239 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 SNX27Q96L92 541 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 LPIN3Q9BQK8 851 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 PLCD4Q9BRC7 762 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 EIF2AQ9BY44 585 aaKnown RBP18.34■□□□□ 0.53
USH1C-205ENST00000527020 MIS12Q9H081 205 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 SLCO1B3Q9NPD5 702 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 CHMP2BQ9UQN3 213 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 STARD13Q9Y3M8 1113 aa18.34■□□□□ 0.53
USH1C-205ENST00000527020 BTBD19C9JJ37 291 aa18.33■□□□□ 0.52
USH1C-205ENST00000527020 PAPSS1O43252 624 aaPredicted RBP18.33■□□□□ 0.52
USH1C-205ENST00000527020 RDXP35241 583 aaKnown RBP18.33■□□□□ 0.52
USH1C-205ENST00000527020 ELK3P41970 407 aa18.33■□□□□ 0.52
USH1C-205ENST00000527020 SLC6A3Q01959 620 aa18.33■□□□□ 0.52
USH1C-205ENST00000527020 DUSP28Q4G0W2 176 aa18.33■□□□□ 0.52
USH1C-205ENST00000527020 SCUBE3Q8IX30 993 aa18.33■□□□□ 0.52
USH1C-205ENST00000527020 PALM2Q8IXS6 379 aa18.33■□□□□ 0.52
USH1C-205ENST00000527020 GBP7Q8N8V2 638 aaPredicted RBP18.33■□□□□ 0.52
USH1C-205ENST00000527020 FAM172AQ8WUF8 416 aa18.33■□□□□ 0.52
USH1C-205ENST00000527020 USP6NLQ92738 828 aa18.33■□□□□ 0.52
USH1C-205ENST00000527020 C18orf25Q96B23 403 aaPredicted RBP18.33■□□□□ 0.52
USH1C-205ENST00000527020 ECT2Q9H8V3 914 aa18.33■□□□□ 0.52
USH1C-205ENST00000527020 PLEKHA5Q9HAU0 1116 aa18.33■□□□□ 0.52
USH1C-205ENST00000527020 CDHR5Q9HBB8 845 aa18.33■□□□□ 0.52
USH1C-205ENST00000527020 PCDH18Q9HCL0 1135 aa18.33■□□□□ 0.52
USH1C-205ENST00000527020 SETD4Q9NVD3 440 aa18.33■□□□□ 0.52
USH1C-205ENST00000527020 PHTF1Q9UMS5 762 aa18.33■□□□□ 0.52
USH1C-205ENST00000527020 DERAQ9Y315 318 aa18.33■□□□□ 0.52
USH1C-205ENST00000527020 TSHRP16473 764 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 KRT81Q14533 505 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 PDK2Q15119 407 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 SNCBQ16143 134 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 KLHL38Q2WGJ6 581 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 SYCP2LQ5T4T6 812 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 SWT1Q5T5J6 900 aaKnown RBP18.32■□□□□ 0.52
USH1C-205ENST00000527020 PCDH19Q8TAB3 1148 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 TEKT4Q8WW24 435 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 B3GNT5Q9BYG0 378 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 NGRNQ9NPE2 291 aaKnown RBP18.32■□□□□ 0.52
USH1C-205ENST00000527020 HES2Q9Y543 173 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 TEX264Q9Y6I9 313 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 CFAP73A6NFT4 308 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 H7C0C1 242 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 HCRTO43612 131 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 STRNO43815 780 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 GPR32O75388 356 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 TFE3P19532 575 aaPredicted RBP18.32■□□□□ 0.52
USH1C-205ENST00000527020 ATP5OP48047 213 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 KCNJ2P63252 427 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms