RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 DARS2Q6PI48 645 aaKnown RBP12.16□□□□□ -0.46
LINC01001-201ENST00000526704 SH3TC2Q8TF17 1288 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 TRAPPC12Q8WVT3 735 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 NAF1Q96HR8 494 aaKnown RBP12.16□□□□□ -0.46
LINC01001-201ENST00000526704 ADPGKQ9BRR6 497 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 TMEM120AQ9BXJ8 343 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 CADM1Q9BY67 442 aaKnown RBP12.16□□□□□ -0.46
LINC01001-201ENST00000526704 FZD8Q9H461 694 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 CNTN3Q9P232 1028 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 TTLL3Q9Y4R7 772 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 AVILO75366 819 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 IL18RAPO95256 599 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 PYGBP11216 843 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 BGNP21810 368 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 CALRP27797 417 aaKnown RBP12.16□□□□□ -0.46
LINC01001-201ENST00000526704 PCK1P35558 622 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 GPD2P43304 727 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 ARFIP2P53365 341 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 CDH6P55285 790 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 CDK16Q00536 496 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 LBX2Q6XYB7 198 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 PRPF39Q86UA1 669 aaKnown RBP12.16□□□□□ -0.46
LINC01001-201ENST00000526704 CXorf38Q8TB03 319 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 TTC17Q96AE7 1141 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 FAXDC2Q96IV6 333 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 PIWIL1Q96J94 861 aaKnown RBP12.16□□□□□ -0.46
LINC01001-201ENST00000526704 NLRP4Q96MN2 994 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 GPR20Q99678 358 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 MINDY3Q9H8M7 445 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 FBXO6Q9NRD1 293 aaPredicted RBP12.16□□□□□ -0.46
LINC01001-201ENST00000526704 ASNSD1Q9NWL6 643 aa12.16□□□□□ -0.46
LINC01001-201ENST00000526704 ZNF638Q14966 1978 aaKnown RBP12.15□□□□□ -0.46
LINC01001-201ENST00000526704 H0Y3Z8 333 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 INO80B-WBP1J3KQ70 363 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 CHADO15335 359 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 DNAJC6O75061 913 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 LGR5O75473 907 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 SMNDC1O75940 238 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC01001-201ENST00000526704 FAM155BO75949 473 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 TGDSO95455 350 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 ITGB3P05106 788 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 INHBAP08476 426 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 DLDP09622 509 aaKnown RBP12.15□□□□□ -0.46
LINC01001-201ENST00000526704 SERPINB3P29508 390 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 ZNF143P52747 638 aaPredicted RBP12.15□□□□□ -0.46
LINC01001-201ENST00000526704 YWHAZP63104 245 aaKnown RBP12.15□□□□□ -0.46
LINC01001-201ENST00000526704 MBTD1Q05BQ5 628 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 HSDL1Q3SXM5 330 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 SH3D19Q5HYK7 790 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 NOL9Q5SY16 702 aaKnown RBP12.15□□□□□ -0.46
LINC01001-201ENST00000526704 C4orf50Q6ZRC1 276 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 RIOX2Q8IUF8 465 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 APOBEC3FQ8IUX4 373 aaKnown RBP12.15□□□□□ -0.46
LINC01001-201ENST00000526704 ZBTB10Q96DT7 871 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 CFAP36Q96G28 342 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 TMEM176AQ96HP8 235 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 INO80BQ9C086 356 aaPredicted RBP12.15□□□□□ -0.46
LINC01001-201ENST00000526704 RPF1Q9H9Y2 349 aaKnown RBP12.15□□□□□ -0.46
LINC01001-201ENST00000526704 LRRC42Q9Y546 428 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 IKBKGQ9Y6K9 419 aa12.15□□□□□ -0.46
LINC01001-201ENST00000526704 SCN1AP35498 2009 aa12.15□□□□□ -0.47
LINC01001-201ENST00000526704 CFAP69A5D8W1 941 aa12.15□□□□□ -0.47
LINC01001-201ENST00000526704 KIF3CO14782 793 aa12.15□□□□□ -0.47
LINC01001-201ENST00000526704 LIN7AO14910 233 aaPredicted RBP12.15□□□□□ -0.47
LINC01001-201ENST00000526704 SPAG6O75602 509 aa12.15□□□□□ -0.47
LINC01001-201ENST00000526704 IL1BP01584 269 aa12.15□□□□□ -0.47
LINC01001-201ENST00000526704 TGFB3P10600 412 aa12.15□□□□□ -0.47
LINC01001-201ENST00000526704 CYP3A5P20815 502 aa12.15□□□□□ -0.47
LINC01001-201ENST00000526704 GPD1P21695 349 aa12.15□□□□□ -0.47
LINC01001-201ENST00000526704 STIP1P31948 543 aaKnown RBP12.15□□□□□ -0.47
LINC01001-201ENST00000526704 CBLBQ13191 982 aa12.15□□□□□ -0.47
LINC01001-201ENST00000526704 BLMHQ13867 455 aa12.15□□□□□ -0.47
LINC01001-201ENST00000526704 TMEM132AQ24JP5 1023 aa12.15□□□□□ -0.47
LINC01001-201ENST00000526704 C15orf59Q2T9L4 293 aaPredicted RBP12.15□□□□□ -0.47
LINC01001-201ENST00000526704 DALRD3Q5D0E6 543 aaKnown RBP12.15□□□□□ -0.47
LINC01001-201ENST00000526704 JADE1Q6IE81 842 aa12.15□□□□□ -0.47
LINC01001-201ENST00000526704 C1orf228Q6PIY5 440 aa12.15□□□□□ -0.47
LINC01001-201ENST00000526704 FBXO41Q8TF61 875 aa12.15□□□□□ -0.47
LINC01001-201ENST00000526704 FAF2Q96CS3 445 aa12.15□□□□□ -0.47
LINC01001-201ENST00000526704 PLAC1Q9HBJ0 212 aa12.15□□□□□ -0.47
LINC01001-201ENST00000526704 USP29Q9HBJ7 922 aa12.15□□□□□ -0.47
LINC01001-201ENST00000526704 PNPLA8Q9NP80 782 aa12.15□□□□□ -0.47
LINC01001-201ENST00000526704 C2orf71A6NGG8 1288 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 C2CD4BA6NLJ0 364 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 LACTBL1A8MY62 500 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 E5RJQ4 531 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 PIK3R2O00459 728 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 CCDC22O60826 627 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 LUC7L3O95232 432 aaKnown RBP12.14□□□□□ -0.47
LINC01001-201ENST00000526704 IQCF3P0C7M6 154 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 GCLCP48506 637 aaPredicted RBP12.14□□□□□ -0.47
LINC01001-201ENST00000526704 SERPINB4P48594 390 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 PTDSS1P48651 473 aaKnown RBP12.14□□□□□ -0.47
LINC01001-201ENST00000526704 CDHR3Q6ZTQ4 885 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 FAM183BPQ6ZVS7 135 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.14□□□□□ -0.47
LINC01001-201ENST00000526704 UBA3Q8TBC4 463 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 BTBD10Q9BSF8 475 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 CNPY3Q9BT09 278 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 FAM167BQ9BTA0 163 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms