RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 FNBP1Q96RU3 617 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 CGRRF1Q99675 332 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 MRPL45Q9BRJ2 306 aaKnown RBP12.49□□□□□ -0.41
CAPN1-204ENST00000526468 TTLL2Q9BWV7 592 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 ELOVL4Q9GZR5 314 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 TNMDQ9H2S6 317 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 TMEM9BQ9NQ34 198 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 PRDM4Q9UKN5 801 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 KNL1Q8NG31 2342 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 NUMA1Q14980 2115 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 GOLGA4Q13439 2230 aaKnown RBP12.48□□□□□ -0.41
CAPN1-204ENST00000526468 ATP8B3O60423 1300 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 ATXN2Q99700 1313 aaKnown RBP12.48□□□□□ -0.41
CAPN1-204ENST00000526468 ZNF840PA6NDX5 716 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 ANTXRLA6NF34 631 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 PATE3B3GLJ2 98 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 K7EQS6 105 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 SLC9A3R1O14745 358 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-204ENST00000526468 GIPC1O14908 333 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 KHNYNO15037 678 aaKnown RBP12.48□□□□□ -0.41
CAPN1-204ENST00000526468 EIF3DO15371 548 aaKnown RBP eCLIP12.48□□□□□ -0.41
CAPN1-204ENST00000526468 ALDH1A2O94788 518 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 KLF8O95600 359 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-204ENST00000526468 OAS1P00973 400 aaKnown RBP12.48□□□□□ -0.41
CAPN1-204ENST00000526468 APODP05090 189 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 ADH5P11766 374 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 SYT1P21579 422 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 CACNA2D1P54289 1103 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 NOP14P78316 857 aaKnown RBP12.48□□□□□ -0.41
CAPN1-204ENST00000526468 SLC7A9P82251 487 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 ZXDBP98169 803 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 CUL4AQ13619 759 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 DHCR24Q15392 516 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 CRY1Q16526 586 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 GAB4Q2WGN9 574 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 FAM26FQ5R3K3 315 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 SH3PXD2AQ5TCZ1 1133 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 TRAPPC11Q7Z392 1133 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 LIMS2Q7Z4I7 341 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 C12orf40Q86WS4 652 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 DDX42Q86XP3 938 aaKnown RBP eCLIP12.48□□□□□ -0.41
CAPN1-204ENST00000526468 SFTPA1Q8IWL2 248 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 WHAMMQ8TF30 809 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 HMGB4Q8WW32 186 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 PIGKQ92643 395 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 CCDC127Q96BQ5 260 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 ZNF518BQ9C0D4 1074 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 DPEP3Q9H4B8 488 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 AGPAT3Q9NRZ7 376 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 SPTLC3Q9NUV7 552 aa12.48□□□□□ -0.41
CAPN1-204ENST00000526468 CABIN1Q9Y6J0 2220 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 TCRBV21S2A2A0A5A6 115 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-204ENST00000526468 KAT7O95251 611 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 OLFM2O95897 454 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 TIE1P35590 1138 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 PPP3CCP48454 512 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 MRPS21P82921 87 aaKnown RBP12.47□□□□□ -0.41
CAPN1-204ENST00000526468 CYP24A1Q07973 514 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 TAF10Q12962 218 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 SLC39A14Q15043 492 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 UAP1L1Q3KQV9 507 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 TDRD10Q5VZ19 366 aaKnown RBP12.47□□□□□ -0.41
CAPN1-204ENST00000526468 SCARA5Q6ZMJ2 495 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 NELFCDQ8IXH7 590 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 RDH13Q8NBN7 331 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 TXNDC5Q8NBS9 432 aaKnown RBP12.47□□□□□ -0.41
CAPN1-204ENST00000526468 B3GALNT2Q8NCR0 500 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 FBXO32Q969P5 355 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 DHX58Q96C10 678 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 C8orf48Q96LL4 319 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 PNKPQ96T60 521 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 TRIM9Q9C026 710 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 LRRC27Q9C0I9 530 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 KIAA1586Q9HCI6 787 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 ZDHHC4Q9NPG8 344 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 ARHGEF4Q9NR80 690 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 FOXD4L1Q9NU39 408 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 TMEM30AQ9NV96 361 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 NME7Q9Y5B8 376 aa12.47□□□□□ -0.41
CAPN1-204ENST00000526468 ASPMQ8IZT6 3477 aa12.46□□□□□ -0.41
CAPN1-204ENST00000526468 A8MXQ7 604 aa12.46□□□□□ -0.41
CAPN1-204ENST00000526468 SGK1O00141 431 aa12.46□□□□□ -0.41
CAPN1-204ENST00000526468 CLDN5O00501 218 aa12.46□□□□□ -0.41
CAPN1-204ENST00000526468 MAP3K13O43283 966 aa12.46□□□□□ -0.41
CAPN1-204ENST00000526468 TACC1O75410 805 aa12.46□□□□□ -0.41
CAPN1-204ENST00000526468 HNRNPLP14866 589 aaKnown RBP eCLIP12.46□□□□□ -0.41
CAPN1-204ENST00000526468 HOXD13P35453 343 aa12.46□□□□□ -0.41
CAPN1-204ENST00000526468 GNL1P36915 607 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-204ENST00000526468 MAPK8P45983 427 aa12.46□□□□□ -0.41
CAPN1-204ENST00000526468 SLC6A11P48066 632 aa12.46□□□□□ -0.41
CAPN1-204ENST00000526468 GABPB1Q06547 395 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-204ENST00000526468 MESP2Q0VG99 397 aa12.46□□□□□ -0.41
CAPN1-204ENST00000526468 TRPC3Q13507 836 aa12.46□□□□□ -0.41
CAPN1-204ENST00000526468 PSMD6Q15008 389 aa12.46□□□□□ -0.41
CAPN1-204ENST00000526468 WDR72Q3MJ13 1102 aa12.46□□□□□ -0.41
CAPN1-204ENST00000526468 TRIM61Q5EBN2 209 aa12.46□□□□□ -0.41
CAPN1-204ENST00000526468 EOGTQ5NDL2 527 aa12.46□□□□□ -0.41
CAPN1-204ENST00000526468 DNTTIP2Q5QJE6 756 aaKnown RBP12.46□□□□□ -0.41
CAPN1-204ENST00000526468 CCDC183Q5T5S1 534 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms