RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 HMGXB4Q9UGU5 601 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 WNT6Q9Y6F9 365 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 SPAG17Q6Q759 2223 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 MYO18AQ92614 2054 aaKnown RBP11.09□□□□□ -0.63
RBBP4-216ENST00000525506 SCAMP3O14828 347 aaKnown RBP11.09□□□□□ -0.63
RBBP4-216ENST00000525506 LILRB5O75023 590 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 TBXAS1P24557 533 aaPredicted RBP11.09□□□□□ -0.63
RBBP4-216ENST00000525506 CXCL12P48061 93 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 PDE6CP51160 858 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 CCR3P51677 355 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 YWHAEP62258 255 aaKnown RBP11.09□□□□□ -0.63
RBBP4-216ENST00000525506 TAF10Q12962 218 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 USP4Q13107 963 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 CCINQ13939 588 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 LRRC32Q14392 662 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 ZNF268Q14587 947 aaPredicted RBP11.09□□□□□ -0.63
RBBP4-216ENST00000525506 LPAL2Q16609 132 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 HEATR6Q6AI08 1181 aaKnown RBP11.09□□□□□ -0.63
RBBP4-216ENST00000525506 FSTL4Q6MZW2 842 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 PAQR9Q6ZVX9 377 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 ACOT1Q86TX2 421 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 GPT2Q8TD30 523 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 SH3RF2Q8TEC5 729 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 SEMA4DQ92854 862 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 MSANTD3Q96H12 275 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 NT5C1AQ9BXI3 368 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 RNF38Q9H0F5 515 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 LINC00597Q9H2U6 94 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 KIF9Q9HAQ2 790 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 FBRSL1Q9HCM7 1045 aaKnown RBP11.09□□□□□ -0.63
RBBP4-216ENST00000525506 CSNK1G1Q9HCP0 422 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 PNPLA8Q9NP80 782 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 DUS2Q9NX74 493 aaKnown RBP11.09□□□□□ -0.63
RBBP4-216ENST00000525506 TRPM5Q9NZQ8 1165 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 PCDHGA2Q9Y5H1 932 aa11.09□□□□□ -0.63
RBBP4-216ENST00000525506 ZNF840PA6NDX5 716 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 CHURC1-FNTBB4DL54 471 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 EGFP01133 1207 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 CCDC130P13994 396 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 FNTBP49356 437 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 GALK1P51570 392 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 NDST1P52848 882 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 SRSF5Q13243 272 aaKnown RBP11.08□□□□□ -0.64
RBBP4-216ENST00000525506 EML3Q32P44 896 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 DPCR1Q3MIW9 517 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 DGKKQ5KSL6 1271 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 C1orf228Q6PIY5 440 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 MAMSTRQ6ZN01 415 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 FAM35AQ86V20 835 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 FAM114A1Q8IWE2 563 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 FUKQ8N0W3 1084 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 SPEM1Q8N4L4 309 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 KIAA1958Q8N8K9 716 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 SCAMP5Q8TAC9 235 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 OVCA2Q8WZ82 227 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 JAKMIP2Q96AA8 810 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 SRRTQ9BXP5 876 aaKnown RBP11.08□□□□□ -0.64
RBBP4-216ENST00000525506 THAP9Q9H5L6 903 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 ECT2Q9H8V3 914 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 DMAP1Q9NPF5 467 aaPredicted RBP11.08□□□□□ -0.64
RBBP4-216ENST00000525506 COMMD8Q9NX08 183 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 SMPD4Q9NXE4 827 aa11.08□□□□□ -0.64
RBBP4-216ENST00000525506 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.08□□□□□ -0.64
RBBP4-216ENST00000525506 FAM92AA1XBS5 289 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 GTPBP10A4D1E9 387 aaKnown RBP11.07□□□□□ -0.64
RBBP4-216ENST00000525506 K7ESF4 209 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 LEFTY2O00292 366 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 TRDMT1O14717 391 aaKnown RBP11.07□□□□□ -0.64
RBBP4-216ENST00000525506 BEST1O76090 585 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 RTN3O95197 1032 aaPredicted RBP11.07□□□□□ -0.64
RBBP4-216ENST00000525506 AFPP02771 609 aaKnown RBP11.07□□□□□ -0.64
RBBP4-216ENST00000525506 GJA4P35212 333 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 IFNAR2P48551 515 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 STX17P56962 302 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 GCNT1Q02742 428 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 CUL2Q13617 745 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 PDGFRLQ15198 375 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 TMEM196Q5HYL7 178 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 NUP93Q8N1F7 819 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 C12orf29Q8N999 325 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 PDZD8Q8NEN9 1154 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 OSCP1Q8WVF1 389 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 RUBCNQ92622 972 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 EZH1Q92800 747 aaPredicted RBP11.07□□□□□ -0.64
RBBP4-216ENST00000525506 FAM81BQ96LP2 452 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 MED15Q96RN5 788 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 TWNKQ96RR1 684 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 HNRNPABQ99729 332 aaKnown RBP11.07□□□□□ -0.64
RBBP4-216ENST00000525506 SMOQ99835 787 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 IER2Q9BTL4 223 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 KRT82Q9NSB4 513 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 CISHQ9NSE2 258 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 FAM49BQ9NUQ9 324 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 IL37Q9NZH6 218 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 CHORDC1Q9UHD1 332 aaPredicted RBP11.07□□□□□ -0.64
RBBP4-216ENST00000525506 ARHGAP26Q9UNA1 814 aa11.07□□□□□ -0.64
RBBP4-216ENST00000525506 SMG5Q9UPR3 1016 aaKnown RBP11.07□□□□□ -0.64
RBBP4-216ENST00000525506 DCHS1Q96JQ0 3298 aa11.06□□□□□ -0.64
RBBP4-216ENST00000525506 ANTXRLA6NF34 631 aa11.06□□□□□ -0.64
RBBP4-216ENST00000525506 TNFRSF10BO14763 440 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms