RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 ZFP14Q9HCL3 533 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 ACP6Q9NPH0 428 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 CNGB3Q9NQW8 809 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 OBP2AQ9NY56 170 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 CLIC5Q9NZA1 410 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 AIPL1Q9NZN9 384 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 CHORDC1Q9UHD1 332 aaPredicted RBP13.04□□□□□ -0.32
CCS-202ENST00000525435 TCF20Q9UGU0 1960 aaKnown RBP13.03□□□□□ -0.32
CCS-202ENST00000525435 TRAV19A0A0A6YYK7 116 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 SART1O43290 800 aaKnown RBP13.03□□□□□ -0.32
CCS-202ENST00000525435 GFPT2O94808 682 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 ZBED1O96006 694 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 USP17L7P0C7H9 530 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 GJA1P17302 382 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 HDCP19113 662 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 CDH5P33151 784 aaPredicted RBP13.03□□□□□ -0.32
CCS-202ENST00000525435 AVPR1AP37288 418 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 CDR2Q01850 454 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 HTR4Q13639 388 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 ZNF268Q14587 947 aaPredicted RBP13.03□□□□□ -0.32
CCS-202ENST00000525435 FAM78AQ5JUQ0 283 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 HECTD3Q5T447 861 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 TXNDC8Q6A555 127 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 DENND1BQ6P3S1 775 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 KLHDC10Q6PID8 442 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 TRIM72Q6ZMU5 477 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 TADA2BQ86TJ2 420 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 GAS2L3Q86XJ1 694 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 RNF135Q8IUD6 432 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 ARID3BQ8IVW6 561 aaPredicted RBP13.03□□□□□ -0.32
CCS-202ENST00000525435 TMEM35BQ8NCS4 154 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 ZSCAN18Q8TBC5 510 aaPredicted RBP13.03□□□□□ -0.32
CCS-202ENST00000525435 EPS8L1Q8TE68 723 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 IRGQQ8WZA9 623 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 ELSPBP1Q96BH3 223 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 SLITRK6Q9H5Y7 841 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 KCNK12Q9HB15 430 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 CAPN11Q9UMQ6 739 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 NOTCH4Q99466 2003 aa13.03□□□□□ -0.32
CCS-202ENST00000525435 DOCK6Q96HP0 2047 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 TULP2O00295 520 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 TADA3O75528 432 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 OLFM2O95897 454 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 OAS1P00973 400 aaKnown RBP13.02□□□□□ -0.33
CCS-202ENST00000525435 CALCAP01258 141 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 PNMA6AP0CW24 399 aaPredicted RBP13.02□□□□□ -0.33
CCS-202ENST00000525435 RALAP11233 206 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 SLC7A9P82251 487 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 ZBED6P86452 979 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 TDGQ13569 410 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 TRIM14Q14142 442 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 SPECC1LQ69YQ0 1117 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 POTEHQ6S545 545 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 GPRIN1Q7Z2K8 1008 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 IRF2BP2Q7Z5L9 587 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 NOP9Q86U38 636 aaKnown RBP13.02□□□□□ -0.33
CCS-202ENST00000525435 SIX6OS1Q8N1H7 587 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 WDTC1Q8N5D0 677 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 CELF5Q8N6W0 485 aaKnown RBP13.02□□□□□ -0.33
CCS-202ENST00000525435 MAB21L3Q8N8X9 362 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 TRIM62Q9BVG3 475 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 MIS12Q9H081 205 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 PDCL3Q9H2J4 239 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 KIF9Q9HAQ2 790 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 GMIPQ9P107 970 aa13.02□□□□□ -0.33
CCS-202ENST00000525435 NOCTQ9UK39 431 aaKnown RBP13.02□□□□□ -0.33
CCS-202ENST00000525435 LUC7L2Q9Y383 392 aaKnown RBP13.02□□□□□ -0.33
CCS-202ENST00000525435 BZW2Q9Y6E2 419 aaKnown RBP13.02□□□□□ -0.33
CCS-202ENST00000525435 PTPRDP23468 1912 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 BDP1A6H8Y1 2624 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 NRG2O14511 850 aaPredicted RBP13.01□□□□□ -0.33
CCS-202ENST00000525435 GABBR2O75899 941 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 TCF3P15923 654 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 SP100P23497 879 aaPredicted RBP13.01□□□□□ -0.33
CCS-202ENST00000525435 PRKCIP41743 596 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 CYP4F8P98187 520 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 ADIGQ0VDE8 80 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 IFRD2Q12894 506 aaPredicted RBP13.01□□□□□ -0.33
CCS-202ENST00000525435 PDCLQ13371 301 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 SFMBT2Q5VUG0 894 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 PARM1Q6UWI2 310 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 BEND5Q7L4P6 421 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 ZDHHC17Q8IUH5 632 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 VSTM4Q8IW00 320 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 MFSD6LQ8IWD5 586 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 UBALD2Q8IYN6 164 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 SLC44A3Q8N4M1 653 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 DEPDC1BQ8WUY9 529 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 PPP1R13BQ96KQ4 1090 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 ULBP1Q9BZM6 244 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 TRIM5Q9C035 493 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 CD320Q9NPF0 282 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 TDP1Q9NUW8 608 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 ARHGAP26Q9UNA1 814 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 SORCS3Q9UPU3 1222 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 NUMBLQ9Y6R0 609 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 C2orf16Q68DN1 1984 aa13.01□□□□□ -0.33
CCS-202ENST00000525435 MUC3AQ02505 3323 aa13□□□□□ -0.33
CCS-202ENST00000525435 LRRC53A6NM62 1247 aa13□□□□□ -0.33
CCS-202ENST00000525435 DPYSL4O14531 572 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms