RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 RABEPKQ7Z6M1 372 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 CACUL1Q86Y37 369 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 MIB1Q86YT6 1006 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 CHPFQ8IZ52 775 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 ZCCHC9Q8N567 271 aaKnown RBP12.42□□□□□ -0.42
SDCBP-211ENST00000523441 CALML4Q96GE6 196 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.42□□□□□ -0.42
SDCBP-211ENST00000523441 KCND2Q9NZV8 630 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 R3HCC1Q9Y3T6 440 aaKnown RBP12.42□□□□□ -0.42
SDCBP-211ENST00000523441 TMEM131Q92545 1883 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 ZNF840PA6NDX5 716 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 F8VP50 259 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 TULP3O75386 442 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 CHRM1P11229 460 aaPredicted RBP12.41□□□□□ -0.42
SDCBP-211ENST00000523441 GNSP15586 552 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 PCSK1P29120 753 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 NTSR1P30989 418 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 LHX1P48742 406 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 GTF2BQ00403 316 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 GAD2Q05329 585 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 TAF10Q12962 218 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 SOWAHAQ2M3V2 549 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 CFAP221Q4G0U5 840 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 MDH1BQ5I0G3 518 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 SYCP2LQ5T4T6 812 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 SDE2Q6IQ49 451 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 DYMQ7RTS9 669 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 TMEM86AQ8N2M4 240 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 GLIS3Q8NEA6 775 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 BHMTQ93088 406 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 MMS19Q96T76 1030 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 MTMR12Q9C0I1 747 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 PCIF1Q9H4Z3 704 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 CRTAC1Q9NQ79 661 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 RBAKQ9NYW8 714 aaPredicted RBP12.41□□□□□ -0.42
SDCBP-211ENST00000523441 DEC1Q9P2X7 70 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 SH3BP1Q9Y3L3 701 aa12.41□□□□□ -0.42
SDCBP-211ENST00000523441 URB1O60287 2271 aaKnown RBP12.41□□□□□ -0.42
SDCBP-211ENST00000523441 GOLGA4Q13439 2230 aaKnown RBP12.41□□□□□ -0.42
SDCBP-211ENST00000523441 A0A1W2PQD8 194 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 TRABD2BA6NFA1 517 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 CLSTN1O94985 981 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 TMEM191BP0C7N4 346 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 ATXN1LP0C7T5 689 aaKnown RBP12.4□□□□□ -0.42
SDCBP-211ENST00000523441 TCF3P15923 654 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 ADSSP30520 456 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 UBA7P41226 1012 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 SLC7A9P82251 487 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 KCNA1Q09470 495 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 C19orf57Q0VDD7 668 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 HSF5Q4G112 596 aaPredicted RBP12.4□□□□□ -0.42
SDCBP-211ENST00000523441 TDRD10Q5VZ19 366 aaKnown RBP12.4□□□□□ -0.42
SDCBP-211ENST00000523441 TRMT11Q7Z4G4 463 aaKnown RBP12.4□□□□□ -0.42
SDCBP-211ENST00000523441 SFR1Q86XK3 245 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 TMEM25Q86YD3 366 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 BBS7Q8IWZ6 715 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 RHBDD1Q8TEB9 315 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 IPO4Q8TEX9 1081 aaKnown RBP12.4□□□□□ -0.42
SDCBP-211ENST00000523441 CACTINQ8WUQ7 758 aaKnown RBP12.4□□□□□ -0.42
SDCBP-211ENST00000523441 WBP2Q969T9 261 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 GAREM1Q9H706 876 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 PDE11AQ9HCR9 933 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 DNAJC17Q9NVM6 304 aaKnown RBP12.4□□□□□ -0.42
SDCBP-211ENST00000523441 CACNA2D2Q9NY47 1150 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 CHORDC1Q9UHD1 332 aaPredicted RBP12.4□□□□□ -0.42
SDCBP-211ENST00000523441 PCOLCE2Q9UKZ9 415 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 LIMCH1Q9UPQ0 1083 aa12.4□□□□□ -0.42
SDCBP-211ENST00000523441 ASH1LQ9NR48 2969 aaKnown RBP12.4□□□□□ -0.42
SDCBP-211ENST00000523441 MYH10P35580 1976 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 A0A1W2PQF6 199 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 WASH3PC4AMC7 463 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 NEDD8-MDP1E9PL57 170 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 GJB3O75712 270 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 EIF2DP41214 584 aaKnown RBP12.39□□□□□ -0.43
SDCBP-211ENST00000523441 MAGEA11P43364 429 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 ZNF131P52739 623 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 CACNA2D1P54289 1103 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 HMGN5P82970 282 aaKnown RBP12.39□□□□□ -0.43
SDCBP-211ENST00000523441 RBP5P82980 135 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 SLC14A1Q13336 389 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 WDR45BQ5MNZ6 344 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 GRAMD4Q6IC98 578 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 TPGS1Q6ZTW0 290 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 PHTF2Q8N3S3 785 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 TOP6BLQ8N6T0 577 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 TERB1Q8NA31 727 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 SCFD1Q8WVM8 642 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 SNX19Q92543 992 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 PCED1BQ96HM7 432 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 FUBP3Q96I24 572 aaKnown RBP eCLIP12.39□□□□□ -0.43
SDCBP-211ENST00000523441 SPATA17Q96L03 361 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 SLITRK1Q96PX8 696 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 FIZ1Q96SL8 496 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 LLPHQ9BRT6 129 aaKnown RBP12.39□□□□□ -0.43
SDCBP-211ENST00000523441 GPR174Q9BXC1 333 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 NACA2Q9H009 215 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 FAM124BQ9H5Z6 455 aaPredicted RBP12.39□□□□□ -0.43
SDCBP-211ENST00000523441 SUSD2Q9UGT4 822 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 HCN2Q9UL51 889 aa12.39□□□□□ -0.43
SDCBP-211ENST00000523441 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms