RNA–Protein interactions for RNA: ENST00000523155.1

IGKV3-25-201, Transcript of immunoglobulin kappa variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGKV3-25, Length 253 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-25-201ENST00000523155 SATB1Q01826 763 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 GRSF1Q12849 480 aaKnown RBP eCLIP9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 GAS6Q14393 721 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 CCDC40Q4G0X9 1142 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 CBWD6Q4V339 395 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 TMEM196Q5HYL7 178 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 CBWD3Q5JTY5 395 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 CBWD5Q5RIA9 395 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 ISM2Q6H9L7 571 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 KLHL10Q6JEL2 608 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 FSTL4Q6MZW2 842 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 TSSK4Q6SA08 328 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 CLEC20AQ6ZU45 233 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 SYNPOQ8N3V7 929 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 C12orf29Q8N999 325 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 ZBTB44Q8NCP5 570 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 SCAMP5Q8TAC9 235 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 WHAMMQ8TF30 809 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 ATRIPQ8WXE1 791 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 CHFRQ96EP1 664 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 DHTKD1Q96HY7 919 aaPredicted RBP9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 CEP63Q96MT8 703 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 HNRNPABQ99729 332 aaKnown RBP9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 ARID3AQ99856 593 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 FAM124BQ9H5Z6 455 aaPredicted RBP9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 METTL14Q9HCE5 456 aaKnown RBP9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 PNPLA8Q9NP80 782 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 SMPD4Q9NXE4 827 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 IL37Q9NZH6 218 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 CHMP5Q9NZZ3 219 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 ARMCX3Q9UH62 379 aaPredicted RBP9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 CTNND2Q9UQB3 1225 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 GVINP1Q7Z2Y8 2422 aa9.42□□□□□ -0.9
IGKV3-25-201ENST00000523155 PLXND1Q9Y4D7 1925 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 BIN1O00499 593 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 SLC9A3R1O14745 358 aaPredicted RBP9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 COCHO43405 550 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 ZDHHC11BP0C7U3 371 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 CD44P16070 742 aaKnown RBP9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 GJA4P35212 333 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 CXCL12P48061 93 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 UBE2HP62256 183 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 YWHAEP62258 255 aaKnown RBP9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 ZXDBP98169 803 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 NR1H3Q13133 447 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 MORC3Q14149 939 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 ZNF394Q53GI3 561 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 HECTD3Q5T447 861 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 SNX30Q5VWJ9 437 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 TTI2Q6NXR4 508 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 FOXR2Q6PJQ5 311 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 GPRIN1Q7Z2K8 1008 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 FILIP1Q7Z7B0 1213 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 NELFBQ8WX92 580 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 SLC35C1Q96A29 364 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 JAKMIP2Q96AA8 810 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 CYFIP2Q96F07 1278 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 P2RY13Q9BPV8 354 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 HINFPQ9BQA5 517 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 NACA2Q9H009 215 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 RNF38Q9H0F5 515 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 EPC1Q9H2F5 836 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 TLR8Q9NR97 1041 aaKnown RBP9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 CISHQ9NSE2 258 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 CFAP97Q9P2B7 532 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 SMG5Q9UPR3 1016 aaKnown RBP9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 COQ4Q9Y3A0 265 aa9.41□□□□□ -0.9
IGKV3-25-201ENST00000523155 VPS13AQ96RL7 3174 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 EP300Q09472 2414 aaPredicted RBP9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 E2F8A0AVK6 867 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 HHLA1C9JL84 531 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 K7ESF4 209 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 CYP26A1O43174 497 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 TLR5O60602 858 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 EGFP01133 1207 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 CYP17A1P05093 508 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 DRD1P21728 446 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 BMP6P22004 513 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 TBXAS1P24557 533 aaPredicted RBP9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 FMO5P49326 533 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 PAK1Q13153 545 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 CUL2Q13617 745 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 FBXO43Q4G163 708 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 PPP1R26Q5T8A7 1209 aaPredicted RBP9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 NAIF1Q69YI7 327 aaPredicted RBP9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 TRIML1Q8N9V2 468 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 SUMF1Q8NBK3 374 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 SLC4A11Q8NBS3 891 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 CD101Q93033 1021 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 TMEM176AQ96HP8 235 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 ZFRQ96KR1 1074 aaKnown RBP9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 DUSP9Q99956 384 aaKnown RBP9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 CCSER2Q9H7U1 834 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 TBC1D14Q9P2M4 693 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 SCML2Q9UQR0 700 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 SH3BP1Q9Y3L3 701 aa9.4□□□□□ -0.9
IGKV3-25-201ENST00000523155 PPP1R3GB7ZBB8 358 aa9.39□□□□□ -0.91
IGKV3-25-201ENST00000523155 SCAMP3O14828 347 aaKnown RBP9.39□□□□□ -0.91
IGKV3-25-201ENST00000523155 PMM2O15305 246 aa9.39□□□□□ -0.91
IGKV3-25-201ENST00000523155 ATG13O75143 517 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms