RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 GLIS1Q8NBF1 620 aa5.08□□□□□ -1.6
SKP1-210ENST00000522855 CACTINQ8WUQ7 758 aaKnown RBP5.08□□□□□ -1.6
SKP1-210ENST00000522855 PPM1EQ8WY54 764 aa5.08□□□□□ -1.6
SKP1-210ENST00000522855 EXTL1Q92935 676 aa5.08□□□□□ -1.6
SKP1-210ENST00000522855 FUBP1Q96AE4 644 aaKnown RBP5.08□□□□□ -1.6
SKP1-210ENST00000522855 RMDN3Q96TC7 470 aa5.08□□□□□ -1.6
SKP1-210ENST00000522855 GDF15Q99988 308 aa5.08□□□□□ -1.6
SKP1-210ENST00000522855 TRIM5Q9C035 493 aa5.08□□□□□ -1.6
SKP1-210ENST00000522855 MYLK2Q9H1R3 596 aa5.08□□□□□ -1.6
SKP1-210ENST00000522855 UNKLQ9H9P5 680 aaKnown RBP5.08□□□□□ -1.6
SKP1-210ENST00000522855 TMEM8AQ9HCN3 771 aa5.08□□□□□ -1.6
SKP1-210ENST00000522855 TMOD4Q9NZQ9 345 aa5.08□□□□□ -1.6
SKP1-210ENST00000522855 DNAJB11Q9UBS4 358 aa5.08□□□□□ -1.6
SKP1-210ENST00000522855 CA14Q9ULX7 337 aa5.08□□□□□ -1.6
SKP1-210ENST00000522855 HPSEQ9Y251 543 aa5.08□□□□□ -1.6
SKP1-210ENST00000522855 MRPS17Q9Y2R5 130 aaKnown RBP5.08□□□□□ -1.6
SKP1-210ENST00000522855 HS3ST3A1Q9Y663 406 aa5.08□□□□□ -1.6
SKP1-210ENST00000522855 PREX2Q70Z35 1606 aa5.08□□□□□ -1.6
SKP1-210ENST00000522855 KIF13AQ9H1H9 1805 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 NPIPB8E9PQR5 432 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 CCNT2O60583 730 aaKnown RBP5.07□□□□□ -1.6
SKP1-210ENST00000522855 TLR5O60602 858 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 GLP2RO95838 553 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 SRGNP10124 158 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 EPHA3P29320 983 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 ATICP31939 592 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 BLOC1S1P78537 153 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 SLC25A3Q00325 362 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 NSUN2Q08J23 767 aaKnown RBP eCLIP5.07□□□□□ -1.6
SKP1-210ENST00000522855 CCNIQ14094 377 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 SPARCL1Q14515 664 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 PFKFB4Q16877 469 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 USP51Q70EK9 711 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 KCTD20Q7Z5Y7 419 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 CCDC28AQ8IWP9 274 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 DNAJB14Q8TBM8 379 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 OSCP1Q8WVF1 389 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 HAS1Q92839 578 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 LENG9Q96B70 501 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 NACC2Q96BF6 587 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 C18orf8Q96DM3 657 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 FAM227BQ96M60 508 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 ADAM2Q99965 735 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 ACTRT3Q9BYD9 372 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 PCDHAC1Q9H158 963 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 SLC25A32Q9H2D1 315 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 SLITRK6Q9H5Y7 841 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 TESQ9UGI8 421 aaKnown RBP5.07□□□□□ -1.6
SKP1-210ENST00000522855 PTPN23Q9H3S7 1636 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 ARHGEF11O15085 1522 aa5.07□□□□□ -1.6
SKP1-210ENST00000522855 UNC119BA6NIH7 251 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 LGALS16A8MUM7 142 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 NARSO43776 548 aaKnown RBP5.06□□□□□ -1.6
SKP1-210ENST00000522855 SPDEFO95238 335 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 MST1P26927 711 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 PPM1FP49593 454 aaPredicted RBP5.06□□□□□ -1.6
SKP1-210ENST00000522855 BCAT1P54687 386 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 NXPH1P58417 271 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 GPS1Q13098 491 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 KCNAB1Q14722 419 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 TUBB8Q3ZCM7 444 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 VPS53Q5VIR6 699 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 GGT6Q6P531 493 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 KCNV1Q6PIU1 500 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 KIAA0408Q6ZU52 694 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 RFX8Q6ZV50 586 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 ARHGEF19Q8IW93 802 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.06□□□□□ -1.6
SKP1-210ENST00000522855 MYCT1Q8N699 235 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 FAM71BQ8TC56 605 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 SSH3Q8TE77 659 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 IPO4Q8TEX9 1081 aaKnown RBP5.06□□□□□ -1.6
SKP1-210ENST00000522855 TRAPPC12Q8WVT3 735 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 PTCD3Q96EY7 689 aaKnown RBP5.06□□□□□ -1.6
SKP1-210ENST00000522855 ZDHHC12Q96GR4 267 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 PAGR1Q9BTK6 254 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 ISCA1Q9BUE6 129 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 INO80BQ9C086 356 aaPredicted RBP5.06□□□□□ -1.6
SKP1-210ENST00000522855 NRDE2Q9H7Z3 1164 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 OBP2BQ9NPH6 170 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 DACT1Q9NYF0 836 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 LRFN1Q9P244 771 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 SERTAD3Q9UJW9 196 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 ZMYND8Q9ULU4 1186 aaPredicted RBP5.06□□□□□ -1.6
SKP1-210ENST00000522855 SSX2IPQ9Y2D8 614 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 TTC37Q6PGP7 1564 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 PTPRGP23470 1445 aa5.06□□□□□ -1.6
SKP1-210ENST00000522855 GCC2Q8IWJ2 1684 aa5.05□□□□□ -1.6
SKP1-210ENST00000522855 MTUS2Q5JR59 1369 aa5.05□□□□□ -1.6
SKP1-210ENST00000522855 OVOL3O00110 214 aa5.05□□□□□ -1.6
SKP1-210ENST00000522855 ACKR2O00590 384 aa5.05□□□□□ -1.6
SKP1-210ENST00000522855 NPC1O15118 1278 aa5.05□□□□□ -1.6
SKP1-210ENST00000522855 SNX2O60749 519 aa5.05□□□□□ -1.6
SKP1-210ENST00000522855 CSF1RP07333 972 aa5.05□□□□□ -1.6
SKP1-210ENST00000522855 PPP3CBP16298 524 aa5.05□□□□□ -1.6
SKP1-210ENST00000522855 NR4A1P22736 598 aa5.05□□□□□ -1.6
SKP1-210ENST00000522855 GATA3P23771 443 aa5.05□□□□□ -1.6
SKP1-210ENST00000522855 RBL1P28749 1068 aa5.05□□□□□ -1.6
SKP1-210ENST00000522855 CCT5P48643 541 aa5.05□□□□□ -1.6
SKP1-210ENST00000522855 PGDP52209 483 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms