RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 ERICH2A1L162 156 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 C4orf47A7E2U8 309 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 HRKO00198 91 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 DNAJA2O60884 412 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 HTR3BO95264 441 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 FOSP01100 380 aaPredicted RBP7.37□□□□□ -1.23
SDCBP-210ENST00000522843 CYP3A4P08684 503 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 IGFBP6P24592 240 aaPredicted RBP7.37□□□□□ -1.23
SDCBP-210ENST00000522843 HOXA6P31267 233 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 SOX9P48436 509 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 PXNP49023 591 aaPredicted RBP7.37□□□□□ -1.23
SDCBP-210ENST00000522843 AFF3P51826 1226 aaKnown RBP7.37□□□□□ -1.23
SDCBP-210ENST00000522843 NFKB2Q00653 900 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 NUCB1Q02818 461 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 PTH1RQ03431 593 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 PPP2R5DQ14738 602 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 MTERF2Q49AM1 385 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 FAM78AQ5JUQ0 283 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 ADGRF1Q5T601 910 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 KIAA1211LQ6NV74 962 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 PKN3Q6P5Z2 889 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 FBXL19Q6PCT2 694 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 C19orf48Q6RUI8 117 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 VITQ6UXI7 678 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 TMTC3Q6ZXV5 915 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 ZNF410Q86VK4 478 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 RHPN2Q8IUC4 686 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 TCEAL4Q96EI5 215 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 LOXL4Q96JB6 756 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 NLRP4Q96MN2 994 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 BRD9Q9H8M2 597 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 DIAPH3Q9NSV4 1193 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 NRBP2Q9NSY0 501 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 TBC1D22BQ9NU19 505 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 SUCLA2Q9P2R7 463 aaPredicted RBP7.37□□□□□ -1.23
SDCBP-210ENST00000522843 KLHL3Q9UH77 587 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 ADAM28Q9UKQ2 775 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 ZNF281Q9Y2X9 895 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 IPPQ9Y573 584 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 ASXL3Q9C0F0 2248 aa7.37□□□□□ -1.23
SDCBP-210ENST00000522843 PCNX2A6NKB5 2137 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 NOTOA8MTQ0 251 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 SH2B2O14492 632 aaPredicted RBP7.36□□□□□ -1.23
SDCBP-210ENST00000522843 EXTL3O43909 919 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 MOSPD3O75425 235 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 RHOP08100 348 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 ITGA4P13612 1032 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 CCNE1P24864 410 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 GDI1P31150 447 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 ZNF76P36508 570 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 MPLP40238 635 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 VIPR2P41587 438 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 CCR2P41597 374 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 ADCY7P51828 1080 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 YARSP54577 528 aaKnown RBP7.36□□□□□ -1.23
SDCBP-210ENST00000522843 TRDNQ13061 729 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 AXDND1Q5T1B0 1012 aaPredicted RBP7.36□□□□□ -1.23
SDCBP-210ENST00000522843 LIN9Q5TKA1 542 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 JAKMIP3Q5VZ66 844 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 KRTAP5-3Q6L8H2 238 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 REC114Q7Z4M0 266 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 SLFN12Q8IYM2 578 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 NCOA7Q8NI08 942 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 GAB3Q8WWW8 586 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 GJA10Q969M2 543 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 RSPRY1Q96DX4 576 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 ZSWIM3Q96MP5 696 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 EDEM2Q9BV94 578 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 COLEC11Q9BWP8 271 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 INO80BQ9C086 356 aaPredicted RBP7.36□□□□□ -1.23
SDCBP-210ENST00000522843 LNPKQ9C0E8 428 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 TRPV5Q9NQA5 729 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 GDE1Q9NZC3 331 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 KLK13Q9UKR3 277 aa7.36□□□□□ -1.23
SDCBP-210ENST00000522843 MRPS23Q9Y3D9 190 aaKnown RBP7.36□□□□□ -1.23
SDCBP-210ENST00000522843 PDCD11Q14690 1871 aaKnown RBP7.36□□□□□ -1.23
SDCBP-210ENST00000522843 APC2O95996 2303 aa7.35□□□□□ -1.23
SDCBP-210ENST00000522843 SMCO2A6NFE2 343 aa7.35□□□□□ -1.23
SDCBP-210ENST00000522843 CDX4O14627 284 aaPredicted RBP7.35□□□□□ -1.23
SDCBP-210ENST00000522843 N4BP3O15049 544 aa7.35□□□□□ -1.23
SDCBP-210ENST00000522843 MAFO75444 373 aaPredicted RBP7.35□□□□□ -1.23
SDCBP-210ENST00000522843 GNAQP50148 359 aa7.35□□□□□ -1.23
SDCBP-210ENST00000522843 NAPAP54920 295 aa7.35□□□□□ -1.23
SDCBP-210ENST00000522843 CDC42EP1Q00587 391 aa7.35□□□□□ -1.23
SDCBP-210ENST00000522843 CREMQ03060 361 aa7.35□□□□□ -1.23
SDCBP-210ENST00000522843 RAB33AQ14088 237 aa7.35□□□□□ -1.23
SDCBP-210ENST00000522843 MPP2Q14168 576 aa7.35□□□□□ -1.23
SDCBP-210ENST00000522843 MRPL58Q14197 206 aaKnown RBP7.35□□□□□ -1.23
SDCBP-210ENST00000522843 SART3Q15020 963 aaKnown RBP7.35□□□□□ -1.23
SDCBP-210ENST00000522843 PSMD5Q16401 504 aa7.35□□□□□ -1.23
SDCBP-210ENST00000522843 COL28A1Q2UY09 1125 aa7.35□□□□□ -1.23
SDCBP-210ENST00000522843 PLK5Q496M5 336 aa7.35□□□□□ -1.23
SDCBP-210ENST00000522843 CACNA2D4Q7Z3S7 1137 aa7.35□□□□□ -1.23
SDCBP-210ENST00000522843 PROSER1Q86XN7 944 aa7.35□□□□□ -1.23
SDCBP-210ENST00000522843 HASPINQ8TF76 798 aa7.35□□□□□ -1.23
SDCBP-210ENST00000522843 ZC3H10Q96K80 434 aaKnown RBP7.35□□□□□ -1.23
SDCBP-210ENST00000522843 G6PC3Q9BUM1 346 aa7.35□□□□□ -1.23
SDCBP-210ENST00000522843 TRMT61BQ9BVS5 477 aaKnown RBP7.35□□□□□ -1.23
SDCBP-210ENST00000522843 CXCL16Q9H2A7 254 aa7.35□□□□□ -1.23
SDCBP-210ENST00000522843 UNC45AQ9H3U1 944 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms