RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 ARMCX5Q6P1M9 558 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 CC2D1AQ6P1N0 951 aaPredicted RBP6.77□□□□□ -1.33
PABPC1-220ENST00000522658 MPZL3Q6UWV2 235 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 DSTYKQ6XUX3 929 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 CACNA2D4Q7Z3S7 1137 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 WDR5BQ86VZ2 330 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 SKAP1Q86WV1 359 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 RALGPS2Q86X27 583 aaPredicted RBP6.77□□□□□ -1.33
PABPC1-220ENST00000522658 SYNPOQ8N3V7 929 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 NELL1Q92832 810 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 MISP3Q96FF7 219 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 PGLYRP2Q96PD5 576 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 FANCD2OSQ96PS1 177 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 POLR3CQ9BUI4 534 aaPredicted RBP6.77□□□□□ -1.33
PABPC1-220ENST00000522658 CCDC113Q9H0I3 377 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 CDT1Q9H211 546 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 ARRDC1-AS1Q9H2J1 176 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 BHMT2Q9H2M3 363 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 ATXN3LQ9H3M9 355 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 RBM12Q9NTZ6 932 aaKnown RBP6.77□□□□□ -1.33
PABPC1-220ENST00000522658 FBXL5Q9UKA1 691 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 TNFSF13BQ9Y275 285 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.77□□□□□ -1.33
PABPC1-220ENST00000522658 CACNA1BQ00975 2339 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 TICRRQ7Z2Z1 1910 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 OTOGLQ3ZCN5 2332 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 TMEM238LA0A1B0GVL6 79 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 OR6C75A6NL08 312 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 H0YCG3 227 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 PFKFB2O60825 505 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 EIF5BO60841 1220 aaKnown RBP6.76□□□□□ -1.33
PABPC1-220ENST00000522658 MED24O75448 989 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 ABLIM3O94929 683 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 MCF2P10911 925 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 CHRNB1P11230 501 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 CDC25CP30307 473 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 GBP1P32455 592 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 AVPR1AP37288 418 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 MCM2P49736 904 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 LIMK1P53667 647 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 MLLT6P55198 1093 aaPredicted RBP6.76□□□□□ -1.33
PABPC1-220ENST00000522658 BNIP3Q12983 259 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 SRSF5Q13243 272 aaKnown RBP6.76□□□□□ -1.33
PABPC1-220ENST00000522658 ORC2Q13416 577 aaPredicted RBP6.76□□□□□ -1.33
PABPC1-220ENST00000522658 ZRSR1Q15695 479 aaKnown RBP6.76□□□□□ -1.33
PABPC1-220ENST00000522658 NAB2Q15742 525 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 MGAT5BQ3V5L5 792 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 EARS2Q5JPH6 523 aaKnown RBP6.76□□□□□ -1.33
PABPC1-220ENST00000522658 GPR158Q5T848 1215 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 DAB2IPQ5VWQ8 1189 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 KRT79Q5XKE5 535 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 Q6ZS52 159 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 METTL23Q86XA0 190 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 CATSPER3Q86XQ3 398 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 FAM184AQ8NB25 1140 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 C3orf58Q8NDZ4 430 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 TTC8Q8TAM2 541 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 BPIFB1Q8TDL5 484 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 CCDC74AQ96AQ1 378 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 CDK5RAP3Q96JB5 506 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 LOXL4Q96JB6 756 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 SEPT5Q99719 369 aaPredicted RBP6.76□□□□□ -1.33
PABPC1-220ENST00000522658 EDEM2Q9BV94 578 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 GJB4Q9NTQ9 266 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 LRWD1Q9UFC0 647 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 KCNG1Q9UIX4 513 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 ZMYM5Q9UJ78 669 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 DNM3Q9UQ16 869 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 ASB3Q9Y575 518 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 U3KQE9 123 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 CACNA1IQ9P0X4 2223 aa6.76□□□□□ -1.33
PABPC1-220ENST00000522658 MYBPHLA2RUH7 354 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 BTBD18B2RXH4 712 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 CLDN3O15551 220 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 HIP1RO75146 1068 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 RHOBTB1O94844 696 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 EPN2O95208 641 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 PAPSS2O95340 614 aaPredicted RBP6.75□□□□□ -1.33
PABPC1-220ENST00000522658 SEC24AO95486 1093 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 TDGF1P13385 188 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 GABRR2P28476 465 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 RDXP35241 583 aaKnown RBP6.75□□□□□ -1.33
PABPC1-220ENST00000522658 MPLP40238 635 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 CCR2P41597 374 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 SOX9P48436 509 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 NOVA1P51513 510 aaKnown RBP6.75□□□□□ -1.33
PABPC1-220ENST00000522658 PSMD2Q13200 908 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 CDK5R2Q13319 367 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 PLCL1Q15111 1095 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 SF3A2Q15428 464 aaKnown RBP6.75□□□□□ -1.33
PABPC1-220ENST00000522658 CCDC6Q16204 474 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 KYAT1Q16773 422 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 ITPRIPL2Q3MIP1 535 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 STPG1Q5TH74 334 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 OVOS1Q6IE37 1185 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 ARID3BQ8IVW6 561 aaPredicted RBP6.75□□□□□ -1.33
PABPC1-220ENST00000522658 PLD6Q8N2A8 252 aaKnown RBP6.75□□□□□ -1.33
PABPC1-220ENST00000522658 BEST2Q8NFU1 509 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 CCDC26Q8TAB7 109 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 GAB3Q8WWW8 586 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms