RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 TMC7Q7Z402 723 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 SYCE1Q8N0S2 351 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 LRRC57Q8N9N7 239 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 ZNF461Q8TAF7 563 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 FEZF2Q8TBJ5 459 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 FNIP1Q8TF40 1166 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 POF1BQ8WVV4 589 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 SPATA17Q96L03 361 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 PGLYRP2Q96PD5 576 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 TCF25Q9BQ70 676 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 IRX2Q9BZI1 471 aaPredicted RBP13.73□□□□□ -0.21
CPNE3-205ENST00000522240 NGRNQ9NPE2 291 aaKnown RBP13.73□□□□□ -0.21
CPNE3-205ENST00000522240 ENTPD7Q9NQZ7 604 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 METTL5Q9NRN9 209 aaKnown RBP13.73□□□□□ -0.21
CPNE3-205ENST00000522240 ANAPC7Q9UJX3 599 aa13.73□□□□□ -0.21
CPNE3-205ENST00000522240 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.72□□□□□ -0.21
CPNE3-205ENST00000522240 H3BNC9 293 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 GOLGA8SH3BPF8 625 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 TNFRSF10BO14763 440 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 TEX28O15482 410 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 BUB1BO60566 1050 aaPredicted RBP13.72□□□□□ -0.21
CPNE3-205ENST00000522240 PALMO75781 387 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 C1RP00736 705 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 ADH1AP07327 375 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 GLI1P08151 1106 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 KRT3P12035 628 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 LCP1P13796 627 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 TNNT1P13805 278 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 ATF2P15336 505 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 MAN1A1P33908 653 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 GRIK1P39086 918 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 TUFMP49411 452 aaKnown RBP13.72□□□□□ -0.21
CPNE3-205ENST00000522240 TKTL1P51854 596 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 SLC5A3P53794 718 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 DAOAP59103 153 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 SLC6A3Q01959 620 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 ADCY1Q08828 1119 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 EFHC1Q5JVL4 640 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 LLGL2Q6P1M3 1020 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 DCUN1D2Q6PH85 259 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 GPRIN1Q7Z2K8 1008 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 SLFN11Q7Z7L1 901 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 SCN4BQ8IWT1 228 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 SLC35F6Q8N357 371 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 TTC9BQ8N6N2 239 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 ATAD1Q8NBU5 361 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 IRGQQ8WZA9 623 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 MCEEQ96PE7 176 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 KCNK16Q96T55 309 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 EMILIN2Q9BXX0 1053 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 LMAN2LQ9H0V9 348 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 COMMD8Q9NX08 183 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 USP3Q9Y6I4 520 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 MYO16Q9Y6X6 1858 aa13.72□□□□□ -0.21
CPNE3-205ENST00000522240 TMEM191CA6NGB0 347 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 HSF2BPO75031 334 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 DAB1O75553 588 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 RTN3O95197 1032 aaPredicted RBP13.71□□□□□ -0.21
CPNE3-205ENST00000522240 CXCL14O95715 111 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 CNPP09543 421 aaKnown RBP13.71□□□□□ -0.21
CPNE3-205ENST00000522240 PBX2P40425 430 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 MRPS5P82675 430 aaKnown RBP13.71□□□□□ -0.21
CPNE3-205ENST00000522240 SMAD3P84022 425 aaKnown RBP13.71□□□□□ -0.21
CPNE3-205ENST00000522240 MGAT5BQ3V5L5 792 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 ZNF697Q5TEC3 545 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 PPP2R2DQ66LE6 453 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 TMEM92Q6UXU6 159 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 SPRED2Q7Z698 418 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.71□□□□□ -0.21
CPNE3-205ENST00000522240 NIPA2Q8N8Q9 360 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 AUTS2Q8WXX7 1259 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 PIWIL1Q96J94 861 aaKnown RBP13.71□□□□□ -0.21
CPNE3-205ENST00000522240 GUCD1Q96NT3 240 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 WDR24Q96S15 920 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 SEPT5Q99719 369 aaPredicted RBP13.71□□□□□ -0.21
CPNE3-205ENST00000522240 TRIM62Q9BVG3 475 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 ULBP1Q9BZM6 244 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 NKX2-4Q9H2Z4 354 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 CRISPLD1Q9H336 500 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 ALG13Q9NP73 1137 aaKnown RBP13.71□□□□□ -0.21
CPNE3-205ENST00000522240 CHORDC1Q9UHD1 332 aaPredicted RBP13.71□□□□□ -0.21
CPNE3-205ENST00000522240 IP6K2Q9UHH9 426 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 TMEM59LQ9UK28 342 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 JRKLQ9Y4A0 524 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 YIPF1Q9Y548 306 aa13.71□□□□□ -0.21
CPNE3-205ENST00000522240 FAM92AA1XBS5 289 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 C2orf71A6NGG8 1288 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 MYO1FO00160 1098 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 PIK3R2O00459 728 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 GRM6O15303 877 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 LPXNO60711 386 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 PROSCO94903 275 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 ZBED1O96006 694 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 DNAJB1P25685 340 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 SLC1A1P43005 524 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 ERVFC1P60507 584 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 RPL7AP62424 266 aaKnown RBP13.7□□□□□ -0.22
CPNE3-205ENST00000522240 DUSP4Q13115 394 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 GPM6BQ13491 265 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 PIGHQ14442 188 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms