RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 SV2AQ7L0J3 742 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 MTERF4Q7Z6M4 381 aaKnown RBP11.54□□□□□ -0.56
MRPS28-208ENST00000521605 FAM71AQ8IYT1 594 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 HACE1Q8IYU2 909 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 CEP112Q8N8E3 955 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 SLC30A5Q8TAD4 765 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 TTC8Q8TAM2 541 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 SHC3Q92529 594 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 GATA6Q92908 595 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 NT5C1BQ96P26 610 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 ALS2CR12Q96Q35 445 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 CGRRF1Q99675 332 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 CORO1BQ9BR76 489 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 MSTO1Q9BUK6 570 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 EDEM2Q9BV94 578 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 LACRTQ9GZZ8 138 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 RAB20Q9NX57 234 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 NAGPAQ9UK23 515 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 WASF3Q9UPY6 502 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 CDY1Q9Y6F8 540 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 A0A087X0T9 212 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 INO80B-WBP1J3KQ70 363 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 TAF4O00268 1085 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 NPTXRO95502 500 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 LRG1P02750 347 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 C4BPAP04003 597 aaKnown RBP11.53□□□□□ -0.56
MRPS28-208ENST00000521605 POU2F2P09086 479 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 FAM228BP0C875 321 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 PTPN2P17706 415 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 VIPR2P41587 438 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 KPNA1P52294 538 aaPredicted RBP11.53□□□□□ -0.56
MRPS28-208ENST00000521605 AMPD2Q01433 879 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 MBTD1Q05BQ5 628 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 NCBP1Q09161 790 aaKnown RBP11.53□□□□□ -0.56
MRPS28-208ENST00000521605 RAB33AQ14088 237 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 WDR44Q5JSH3 913 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 PPP1R2P3Q6NXS1 205 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 MPZL3Q6UWV2 235 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 ZNF571Q7Z3V5 609 aaPredicted RBP11.53□□□□□ -0.56
MRPS28-208ENST00000521605 WDR5BQ86VZ2 330 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 ZNF677Q86XU0 584 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 WDR49Q8IV35 697 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 SLC35F6Q8N357 371 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 RDH13Q8NBN7 331 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 CSGALNACT1Q8TDX6 532 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 GAB3Q8WWW8 586 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 SAAL1Q96ER3 474 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 KIF12Q96FN5 646 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 LOXL4Q96JB6 756 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 ZSWIM3Q96MP5 696 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 NOX5Q96PH1 765 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 FNBP1Q96RU3 617 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 FAM213AQ9BRX8 229 aa11.53□□□□□ -0.56
MRPS28-208ENST00000521605 TARS2Q9BW92 718 aaKnown RBP11.53□□□□□ -0.56
MRPS28-208ENST00000521605 RBAKQ9NYW8 714 aaPredicted RBP11.53□□□□□ -0.56
MRPS28-208ENST00000521605 F5P12259 2224 aa11.52□□□□□ -0.56
MRPS28-208ENST00000521605 SDK1Q7Z5N4 2213 aa11.52□□□□□ -0.56
MRPS28-208ENST00000521605 RCCD1A6NED2 376 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 CES2O00748 559 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 URI1O94763 535 aaPredicted RBP11.52□□□□□ -0.57
MRPS28-208ENST00000521605 IL18RAPO95256 599 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 PAPSS2O95340 614 aaPredicted RBP11.52□□□□□ -0.57
MRPS28-208ENST00000521605 TUBBP07437 444 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 MCF2P10911 925 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 GZMAP12544 262 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 TBXAS1P24557 533 aaPredicted RBP11.52□□□□□ -0.57
MRPS28-208ENST00000521605 RAP1GAPP47736 663 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 HADHBP55084 474 aaKnown RBP11.52□□□□□ -0.57
MRPS28-208ENST00000521605 BPIFB4P59827 614 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 CYP27A1Q02318 531 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 GFPT1Q06210 699 aaPredicted RBP11.52□□□□□ -0.57
MRPS28-208ENST00000521605 TUSC3Q13454 348 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 PRPF4BQ13523 1007 aaKnown RBP11.52□□□□□ -0.57
MRPS28-208ENST00000521605 PLA2G2CQ5R387 149 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 ALKBH5Q6P6C2 394 aaKnown RBP11.52□□□□□ -0.57
MRPS28-208ENST00000521605 TRAPPC11Q7Z392 1133 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 APBB1IPQ7Z5R6 666 aaPredicted RBP11.52□□□□□ -0.57
MRPS28-208ENST00000521605 NT5DC4Q86YG4 428 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 MNS1Q8NEH6 495 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 TAF4BQ92750 862 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 SMARCD2Q92925 531 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 ASB16Q96NS5 453 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 TSPAN18Q96SJ8 248 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 VPS45Q9NRW7 570 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 RNF14Q9UBS8 474 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 ADAMTS1Q9UHI8 967 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 CPSF3Q9UKF6 684 aaKnown RBP11.52□□□□□ -0.57
MRPS28-208ENST00000521605 GUCA1BQ9UMX6 200 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 CNTN6Q9UQ52 1028 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 DMXL2Q8TDJ6 3036 aa11.52□□□□□ -0.57
MRPS28-208ENST00000521605 PDCD11Q14690 1871 aaKnown RBP11.51□□□□□ -0.57
MRPS28-208ENST00000521605 SMG1Q96Q15 3661 aaKnown RBP11.51□□□□□ -0.57
MRPS28-208ENST00000521605 WDR27A2RRH5 827 aa11.51□□□□□ -0.57
MRPS28-208ENST00000521605 GOLGA8IPA6NC78 632 aa11.51□□□□□ -0.57
MRPS28-208ENST00000521605 GOLGA8JA6NMD2 632 aa11.51□□□□□ -0.57
MRPS28-208ENST00000521605 PRRG1O14668 218 aa11.51□□□□□ -0.57
MRPS28-208ENST00000521605 B4GALT5O43286 388 aa11.51□□□□□ -0.57
MRPS28-208ENST00000521605 TADA3O75528 432 aa11.51□□□□□ -0.57
MRPS28-208ENST00000521605 H2AFZP0C0S5 128 aa11.51□□□□□ -0.57
MRPS28-208ENST00000521605 TMEM253P0C7T8 217 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms