RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 ZNF341Q9BYN7 854 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 GLIS2Q9BZE0 524 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 ETNK2Q9NVF9 386 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 SIGLEC16A6NMB1 481 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 MAGEC1O60732 1142 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 GRAP2O75791 330 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 OR6B1O95007 311 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 RAG1P15918 1043 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 KCNA4P22459 653 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 ACTR3P61158 418 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 KRT76Q01546 638 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 R3HDM1Q15032 1099 aaKnown RBP13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 CNGA3Q16281 694 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 CRY2Q49AN0 593 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 ANO5Q75V66 913 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 DRAXINQ8NBI3 349 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 MCPH1Q8NEM0 835 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 GALNT8Q9NY28 637 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 STRIP2Q9ULQ0 834 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 MMP8P22894 467 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 AQP4P55087 323 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 RPS6P62753 249 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 ZBTB41Q5SVQ8 909 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 GALNT4Q8N4A0 578 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 PRPF31Q8WWY3 499 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 MMP19Q99542 508 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 XAB2Q9HCS7 855 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 SSU72Q9NP77 194 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 NGRNQ9NPE2 291 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 APPL1Q9UKG1 709 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 ZNRF3Q9ULT6 936 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 A0A0B4J269 797 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 F8W8V4 182 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 TGDSO95455 350 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 TOP3BO95985 862 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 VAV1P15498 845 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 OSBPP22059 807 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 SPDYAQ5MJ70 313 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 SLC44A1Q8WWI5 657 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 ATXN7L3BQ96GX2 97 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 CNBD2Q96M20 576 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 LRGUKQ96M69 825 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 TMX2Q9Y320 296 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 MAST2Q6P0Q8 1798 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 ANKRD33BA6NCL7 494 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 IRF6O14896 467 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 DNAJC6O75061 913 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 FAM200BP0CF97 657 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 GARTP22102 1010 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 SCNN1BP51168 640 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 SH3BGRP55822 239 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 MMRN1Q13201 1228 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 PPP1R2P3Q6NXS1 205 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 SEPT12Q8IYM1 358 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 TRIM56Q9BRZ2 755 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 Q9H521 79 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 ANKEF1Q9NU02 776 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 FBXO40Q9UH90 709 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 MAGED2Q9UNF1 606 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 DTNAQ9Y4J8 743 aa13.33□□□□□ -0.28
TRAPPC9-208ENST00000520857 UGT1A9O60656 530 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 PDK3Q15120 406 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 NAT8LQ8N9F0 302 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 JOSD2Q8TAC2 188 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 KLC2Q9H0B6 622 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 UGT1A7Q9HAW7 530 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 UGT1A10Q9HAW8 530 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 UGT1A8Q9HAW9 530 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 COMMD3-BMI1R4GMX3 469 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 AIM2O14862 343 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 RGL2O15211 777 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 PMM2O15305 246 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 MYL6P60660 151 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 USP46P62068 366 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 DLG1Q12959 904 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 PPP2R5DQ14738 602 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 PSMD6Q15008 389 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 CYTH1Q15438 398 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 TAF5Q15542 800 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 FAM102AQ5T9C2 384 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 SESTD1Q86VW0 696 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 CHSY1Q86X52 802 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 THNSL1Q8IYQ7 743 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 LARGE2Q8N3Y3 721 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 SLC35B2Q8TB61 432 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 MTMR12Q9C0I1 747 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 PREBQ9HCU5 417 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 PIH1D1Q9NWS0 290 aaKnown RBP13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 IL1RAPL1Q9NZN1 696 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 ARFGEF1Q9Y6D6 1849 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 CAPN8A6NHC0 703 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 CLPTM1O96005 669 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 CCNE2O96020 404 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 VCLP18206 1134 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 KDELR1P24390 212 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 ALDH1B1P30837 517 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 SFNP31947 248 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 MRPS9P82933 396 aaKnown RBP13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 SLC5A9Q2M3M2 681 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms