RNA–Protein interactions for RNA: ENST00000519634.5

CTNNA1-217, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-217ENST00000519634 TCRBV21S2A2A0A5A6 115 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 MYMKA6NI61 221 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 ATXN7O15265 892 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 CLDN3O15551 220 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 GJB3O75712 270 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 C1QL1O75973 258 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 CKMP06732 381 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 VSIG8P0DPA2 414 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 HNRNPLP14866 589 aaKnown RBP eCLIP6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 TCF3P15923 654 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 OPRD1P41143 372 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 MATR3P43243 847 aaKnown RBP eCLIP6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 ABCG1P45844 678 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 PDE6CP51160 858 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 ZNF33AQ06730 810 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 SPAG1Q07617 926 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 HIF1AQ16665 826 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 KYAT1Q16773 422 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 SEZ6Q53EL9 994 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 EFHC2Q5JST6 749 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 RALGAPA1Q6GYQ0 2036 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 ZPBP2Q6X784 338 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 TMPRSS7Q7RTY8 843 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 DCP1BQ8IZD4 617 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 TMEM130Q8N3G9 435 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 ALLCQ8N6M5 410 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 FRMD1Q8N878 549 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 KIAA1958Q8N8K9 716 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 IL17RCQ8NAC3 791 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 OR2I1PQ8NGU4 316 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 SPATA18Q8TC71 538 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 SH3RF2Q8TEC5 729 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 KIF2CQ99661 725 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 ZDHHC5Q9C0B5 715 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 NUCKS1Q9H1E3 243 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 TMEM60Q9H2L4 133 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 FAM124BQ9H5Z6 455 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 RUBCNLQ9H714 662 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 C17orf75Q9HAS0 396 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 TRPC7Q9HCX4 862 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 SUSD2Q9UGT4 822 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 KCNG1Q9UIX4 513 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 MAGED2Q9UNF1 606 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 PCDHB5Q9Y5E4 795 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 RAI2Q9Y5P3 530 aa6.97□□□□□ -1.29
CTNNA1-217ENST00000519634 A0A1W2PNR3 127 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 CAPN8A6NHC0 703 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 LACTBL1A8MY62 500 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 SGK1O00141 431 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 CAPN9O14815 690 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 SLC16A4O15374 487 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 CBFA2T3O75081 653 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 HIP1RO75146 1068 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 ZNF217O75362 1048 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 PRPF40AO75400 957 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 TADA3O75528 432 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 NOL4O94818 638 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 APODP05090 189 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 GNSP15586 552 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 MCM7P33993 719 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 CCT6AP40227 531 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 EIF2DP41214 584 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 TNFRSF4P43489 277 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 GUCY2FP51841 1108 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 RPL10AP62906 217 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 CYP4F3Q08477 520 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 SCRN1Q12765 414 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 KCNB1Q14721 858 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 NFE2Q16621 373 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 PLEKHG6Q3KR16 790 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 SYCP2LQ5T4T6 812 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 SPATA1Q5VX52 437 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 C9orf57Q5W0N0 161 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 SV2AQ7L0J3 742 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 TRMT11Q7Z4G4 463 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 SLCO6A1Q86UG4 719 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 LRRTM3Q86VH5 581 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 DAW1Q8N136 415 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 GALNT15Q8N3T1 639 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 DEFB119Q8N690 84 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 FSIP1Q8NA03 581 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 ZNF837Q96EG3 531 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 TRMT2BQ96GJ1 504 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 MYRFLQ96LU7 910 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 YTHDC1Q96MU7 727 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 PNKPQ96T60 521 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 CDC6Q99741 560 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 NTPCRQ9BSD7 190 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 TIPINQ9BVW5 301 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 LINC00597Q9H2U6 94 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 RPF1Q9H9Y2 349 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 ORC3Q9UBD5 711 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 PCOLCE2Q9UKZ9 415 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 ARHGAP26Q9UNA1 814 aa6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 HELZ2Q9BYK8 2649 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-217ENST00000519634 BPTFQ12830 3046 aa6.95□□□□□ -1.3
CTNNA1-217ENST00000519634 CACNA1EQ15878 2313 aa6.95□□□□□ -1.3
CTNNA1-217ENST00000519634 IGSF10Q6WRI0 2623 aa6.95□□□□□ -1.3
CTNNA1-217ENST00000519634 A0A0A0MRY4 1105 aa6.95□□□□□ -1.3
CTNNA1-217ENST00000519634 ANO9A1A5B4 782 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms