RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 EPS8L1Q8TE68 723 aa14.09□□□□□ -0.15
PABPC1-208ENST00000519004 LRGUKQ96M69 825 aa14.09□□□□□ -0.15
PABPC1-208ENST00000519004 PIGSQ96S52 555 aa14.09□□□□□ -0.15
PABPC1-208ENST00000519004 TMEM47Q9BQJ4 181 aa14.09□□□□□ -0.15
PABPC1-208ENST00000519004 EHD1Q9H4M9 534 aa14.09□□□□□ -0.15
PABPC1-208ENST00000519004 SIAEQ9HAT2 523 aa14.09□□□□□ -0.15
PABPC1-208ENST00000519004 UBE2TQ9NPD8 197 aaPredicted RBP14.09□□□□□ -0.15
PABPC1-208ENST00000519004 KRBA1A5PL33 1030 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 ANKRD34BA5PLL1 514 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 ATE1O95260 518 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 H6PDO95479 791 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 C8BP07358 591 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 GABRB3P28472 473 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 PEX3P56589 373 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 KLHL38Q2WGJ6 581 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 POTEGQ6S5H5 508 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 CDHR3Q6ZTQ4 885 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 ZFPM1Q8IX07 1006 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 LILRA2Q8N149 483 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 CABLES1Q8TDN4 633 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 ATP2A3Q93084 1043 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 THAP11Q96EK4 314 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 UIMC1Q96RL1 719 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 WDR83Q9BRX9 315 aaKnown RBP14.08□□□□□ -0.16
PABPC1-208ENST00000519004 HIPK3Q9H422 1215 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 PARVBQ9HBI1 364 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 PALMDQ9NP74 551 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 XPNPEP1Q9NQW7 623 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 KLHL3Q9UH77 587 aa14.08□□□□□ -0.16
PABPC1-208ENST00000519004 H3BNH8 94 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 ZNF701M0R085 212 aaPredicted RBP14.07□□□□□ -0.16
PABPC1-208ENST00000519004 GCNT3O95395 438 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 CAPNS1P04632 268 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 TCEA1P23193 301 aaKnown RBP14.07□□□□□ -0.16
PABPC1-208ENST00000519004 TUBA4AP68366 448 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 TMPRSS15P98073 1019 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 GPS1Q13098 491 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 NLRP7Q8WX94 980 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 C20orf27Q9GZN8 174 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 VAT1LQ9HCJ6 419 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 GID8Q9NWU2 228 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 PPP1R1BQ9UD71 204 aaPredicted RBP14.07□□□□□ -0.16
PABPC1-208ENST00000519004 VPS51Q9UID3 782 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 EXOC7Q9UPT5 735 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 CARD8Q9Y2G2 431 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 J3QRK9 145 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 GNPATO15228 680 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 ESRRBO95718 433 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 CCDC130P13994 396 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 HSD17B4P51659 736 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 ARSEP51690 589 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 FMO1Q01740 532 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 SF3B4Q15427 424 aaKnown RBP eCLIP14.07□□□□□ -0.163e-16■■■■■ 30.3
PABPC1-208ENST00000519004 NDUFA5Q16718 116 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 RGS21Q2M5E4 152 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 MIER3Q7Z3K6 550 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 ZNF713Q8N859 430 aaPredicted RBP14.07□□□□□ -0.16
PABPC1-208ENST00000519004 E2F7Q96AV8 911 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 FBXL8Q96CD0 374 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 GCOM2Q9BZD3 368 aaPredicted RBP14.07□□□□□ -0.16
PABPC1-208ENST00000519004 CEP44Q9C0F1 390 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 MRPL46Q9H2W6 279 aaKnown RBP14.07□□□□□ -0.16
PABPC1-208ENST00000519004 TRMT112Q9UI30 125 aaKnown RBP14.07□□□□□ -0.16
PABPC1-208ENST00000519004 ANAPC7Q9UJX3 599 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 ERGIC3Q9Y282 383 aa14.07□□□□□ -0.16
PABPC1-208ENST00000519004 CCDC195A0A1B0GUA6 201 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 A0A1W2PQ67 120 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 TNFRSF10AO00220 468 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 ATP2A1O14983 1001 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 MGEA5O60502 916 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 BMP10O95393 424 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 HSPA8P11142 646 aaKnown RBP14.06□□□□□ -0.16
PABPC1-208ENST00000519004 CD247P20963 164 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 ENDOUP21128 410 aaKnown RBP14.06□□□□□ -0.16
PABPC1-208ENST00000519004 TNNI2P48788 182 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 PSMC6P62333 389 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 TXNL4AP83876 142 aaKnown RBP14.06□□□□□ -0.16
PABPC1-208ENST00000519004 GAD2Q05329 585 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 WDR75Q8IWA0 830 aaKnown RBP14.06□□□□□ -0.16
PABPC1-208ENST00000519004 HELQQ8TDG4 1101 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 TRIM56Q9BRZ2 755 aaKnown RBP14.06□□□□□ -0.16
PABPC1-208ENST00000519004 SHCBP1LQ9BZQ2 653 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 ZFYVE28Q9HCC9 887 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 SACM1LQ9NTJ5 587 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 GPRC5DQ9NZD1 345 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 CDC14AQ9UNH5 594 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 SHOC2Q9UQ13 582 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 BCS1LQ9Y276 419 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 CORINQ9Y5Q5 1042 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 ZNF804BA4D1E1 1349 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 GOLGA8SH3BPF8 625 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 GOLGA8MH3BSY2 632 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 MARCH6O60337 910 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 EIF2S1P05198 315 aaKnown RBP14.06□□□□□ -0.16
PABPC1-208ENST00000519004 BMP3P12645 472 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 NELFEP18615 380 aaKnown RBP14.06□□□□□ -0.16
PABPC1-208ENST00000519004 MAPK4P31152 587 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 L1CAMP32004 1257 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 BMXP51813 675 aa14.06□□□□□ -0.16
PABPC1-208ENST00000519004 ADCY7P51828 1080 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms