RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 ZDHHC24Q6UX98 284 aa4.56□□□□□ -1.68
PABPC1-206ENST00000518293 MAVSQ7Z434 540 aa4.56□□□□□ -1.68
PABPC1-206ENST00000518293 DTX2Q86UW9 622 aa4.56□□□□□ -1.68
PABPC1-206ENST00000518293 SESTD1Q86VW0 696 aa4.56□□□□□ -1.68
PABPC1-206ENST00000518293 NTN5Q8WTR8 489 aaPredicted RBP4.56□□□□□ -1.68
PABPC1-206ENST00000518293 FKBP10Q96AY3 582 aa4.56□□□□□ -1.68
PABPC1-206ENST00000518293 NMD3Q96D46 503 aaKnown RBP4.56□□□□□ -1.68
PABPC1-206ENST00000518293 NAF1Q96HR8 494 aaKnown RBP4.56□□□□□ -1.68
PABPC1-206ENST00000518293 APOL5Q9BWW9 433 aa4.56□□□□□ -1.68
PABPC1-206ENST00000518293 CXorf36Q9H7Y0 433 aa4.56□□□□□ -1.68
PABPC1-206ENST00000518293 KIAA1586Q9HCI6 787 aa4.56□□□□□ -1.68
PABPC1-206ENST00000518293 A1CFQ9NQ94 594 aaKnown RBP4.56□□□□□ -1.68
PABPC1-206ENST00000518293 COL20A1Q9P218 1284 aa4.56□□□□□ -1.68
PABPC1-206ENST00000518293 AFF2P51816 1311 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 PIK3C2BO00750 1634 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 COL16A1Q07092 1604 aaPredicted RBP4.55□□□□□ -1.68
PABPC1-206ENST00000518293 LINC00473A8K010 186 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 MGEA5O60502 916 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 MAP4K4O95819 1239 aaPredicted RBP4.55□□□□□ -1.68
PABPC1-206ENST00000518293 CSF1RP07333 972 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 XRCC6P12956 609 aaKnown RBP eCLIP4.55□□□□□ -1.68
PABPC1-206ENST00000518293 ZKSCAN1P17029 563 aaPredicted RBP4.55□□□□□ -1.68
PABPC1-206ENST00000518293 LRPAP1P30533 357 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 DGKEP52429 567 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 RPS16P62249 146 aaKnown RBP4.55□□□□□ -1.68
PABPC1-206ENST00000518293 EIF2B5Q13144 721 aaKnown RBP4.55□□□□□ -1.68
PABPC1-206ENST00000518293 E2F2Q14209 437 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 ERCC6LQ2NKX8 1250 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 RD3Q7Z3Z2 195 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 CAGE1Q8TC20 777 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 TTC17Q96AE7 1141 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 LRRC59Q96AG4 307 aaKnown RBP4.55□□□□□ -1.68
PABPC1-206ENST00000518293 PBKQ96KB5 322 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 ALG8Q9BVK2 526 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 ZNF287Q9HBT7 754 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 SLC52A1Q9NWF4 448 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 AFF4Q9UHB7 1163 aaKnown RBP4.55□□□□□ -1.68
PABPC1-206ENST00000518293 TLK1Q9UKI8 766 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 OGDHLQ9ULD0 1010 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 NWD1Q149M9 1564 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 MAST1Q9Y2H9 1570 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 DUOX2Q9NRD8 1548 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 NCOA2Q15596 1464 aa4.55□□□□□ -1.68
PABPC1-206ENST00000518293 AHDC1Q5TGY3 1603 aaPredicted RBP4.54□□□□□ -1.68
PABPC1-206ENST00000518293 CCDC151A5D8V7 595 aa4.54□□□□□ -1.68
PABPC1-206ENST00000518293 PYCARD-AS1I3L0S3 204 aa4.54□□□□□ -1.68
PABPC1-206ENST00000518293 NR2F6P10588 404 aa4.54□□□□□ -1.68
PABPC1-206ENST00000518293 ZNF37AP17032 561 aaPredicted RBP4.54□□□□□ -1.68
PABPC1-206ENST00000518293 KCNA3P22001 575 aa4.54□□□□□ -1.68
PABPC1-206ENST00000518293 PCSK6P29122 969 aa4.54□□□□□ -1.68
PABPC1-206ENST00000518293 LIPAP38571 399 aa4.54□□□□□ -1.68
PABPC1-206ENST00000518293 CACNA2D1P54289 1103 aa4.54□□□□□ -1.68
PABPC1-206ENST00000518293 KRT17Q04695 432 aa4.54□□□□□ -1.68
PABPC1-206ENST00000518293 MGAT5BQ3V5L5 792 aa4.54□□□□□ -1.68
PABPC1-206ENST00000518293 SLC44A4Q53GD3 710 aa4.54□□□□□ -1.68
PABPC1-206ENST00000518293 FAM98AQ8NCA5 519 aaKnown RBP4.54□□□□□ -1.68
PABPC1-206ENST00000518293 ATG4AQ8WYN0 398 aa4.54□□□□□ -1.68
PABPC1-206ENST00000518293 DUSP26Q9BV47 211 aa4.54□□□□□ -1.68
PABPC1-206ENST00000518293 SARGQ9BW04 601 aa4.54□□□□□ -1.68
PABPC1-206ENST00000518293 XPNPEP3Q9NQH7 507 aa4.54□□□□□ -1.68
PABPC1-206ENST00000518293 IL17RBQ9NRM6 502 aa4.54□□□□□ -1.68
PABPC1-206ENST00000518293 EHD3Q9NZN3 535 aa4.54□□□□□ -1.68
PABPC1-206ENST00000518293 ST3GAL5Q9UNP4 418 aa4.54□□□□□ -1.68
PABPC1-206ENST00000518293 MAP3K1Q13233 1512 aa4.54□□□□□ -1.68
PABPC1-206ENST00000518293 FNDC1Q4ZHG4 1894 aaPredicted RBP4.54□□□□□ -1.68
PABPC1-206ENST00000518293 PIK3R4Q99570 1358 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.53□□□□□ -1.68
PABPC1-206ENST00000518293 F8W8V4 182 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 SLC16A3O15427 465 aaKnown RBP4.53□□□□□ -1.68
PABPC1-206ENST00000518293 TLR5O60602 858 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 C1QL1O75973 258 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 IL1R1P14778 569 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 JUPP14923 745 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 ZFXP17010 805 aaPredicted RBP4.53□□□□□ -1.68
PABPC1-206ENST00000518293 ADORA2AP29274 412 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 GNALP38405 381 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 BMPR2Q13873 1038 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 PTCHD3Q3KNS1 767 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 COBLL1Q53SF7 1204 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 TREML2Q5T2D2 321 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 KRT78Q8N1N4 520 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 BPIFB1Q8TDL5 484 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 PHKBQ93100 1093 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 PPP2R3CQ969Q6 453 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 SPSB4Q96A44 273 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 MSLNLQ96KJ4 702 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 NUP62CLQ9H1M0 184 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 SERTAD4Q9NUC0 356 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 INSL6Q9Y581 213 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 COX11Q9Y6N1 276 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 TET3O43151 1660 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 MROH1Q8NDA8 1641 aa4.53□□□□□ -1.68
PABPC1-206ENST00000518293 A1L4Q6 167 aa4.52□□□□□ -1.69
PABPC1-206ENST00000518293 MBD3L4A6NDZ8 208 aaPredicted RBP4.52□□□□□ -1.69
PABPC1-206ENST00000518293 MBD3L3A6NE82 208 aaPredicted RBP4.52□□□□□ -1.69
PABPC1-206ENST00000518293 PQBP1O60828 265 aaKnown RBP4.52□□□□□ -1.69
PABPC1-206ENST00000518293 URI1O94763 535 aaPredicted RBP4.52□□□□□ -1.69
PABPC1-206ENST00000518293 IL6RP08887 468 aaPredicted RBP4.52□□□□□ -1.69
PABPC1-206ENST00000518293 CDK4P11802 303 aa4.52□□□□□ -1.69
PABPC1-206ENST00000518293 SLC5A1P13866 664 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms