RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.47■■□□□ 1.51
SLIT3-204ENST00000518140 KANSL3Q9P2N6 904 aa24.47■■□□□ 1.51
SLIT3-204ENST00000518140 DPYSL4O14531 572 aa24.47■■□□□ 1.51
SLIT3-204ENST00000518140 KRT7P08729 469 aa24.47■■□□□ 1.51
SLIT3-204ENST00000518140 PCK1P35558 622 aa24.47■■□□□ 1.51
SLIT3-204ENST00000518140 BCAR1P56945 870 aa24.47■■□□□ 1.51
SLIT3-204ENST00000518140 DHX34Q14147 1143 aaKnown RBP24.47■■□□□ 1.51
SLIT3-204ENST00000518140 SND1Q7KZF4 910 aaKnown RBP eCLIP24.47■■□□□ 1.51
SLIT3-204ENST00000518140 CCDC105Q8IYK2 499 aa24.47■■□□□ 1.51
SLIT3-204ENST00000518140 HSPH1Q92598 858 aa24.47■■□□□ 1.51
SLIT3-204ENST00000518140 NRDE2Q9H7Z3 1164 aa24.47■■□□□ 1.51
SLIT3-204ENST00000518140 NGRNQ9NPE2 291 aaKnown RBP24.47■■□□□ 1.51
SLIT3-204ENST00000518140 hCG_1818297A0A087WSY0 165 aa24.46■■□□□ 1.51
SLIT3-204ENST00000518140 KDELR1P24390 212 aa24.46■■□□□ 1.51
SLIT3-204ENST00000518140 SLC8A3P57103 927 aa24.46■■□□□ 1.51
SLIT3-204ENST00000518140 INTS6LQ5JSJ4 861 aaKnown RBP24.46■■□□□ 1.51
SLIT3-204ENST00000518140 CTU1Q7Z7A3 348 aaKnown RBP24.46■■□□□ 1.51
SLIT3-204ENST00000518140 FAM172AQ8WUF8 416 aa24.46■■□□□ 1.51
SLIT3-204ENST00000518140 SEC14L1Q92503 715 aa24.46■■□□□ 1.51
SLIT3-204ENST00000518140 FAM193BQ96PV7 902 aaPredicted RBP24.46■■□□□ 1.51
SLIT3-204ENST00000518140 ERP44Q9BS26 406 aa24.46■■□□□ 1.51
SLIT3-204ENST00000518140 DSEQ9UL01 958 aa24.46■■□□□ 1.51
SLIT3-204ENST00000518140 ATP11BQ9Y2G3 1177 aa24.46■■□□□ 1.51
SLIT3-204ENST00000518140 UTP11Q9Y3A2 253 aaKnown RBP24.46■■□□□ 1.51
SLIT3-204ENST00000518140 CXCL10P02778 98 aa24.46■■□□□ 1.51
SLIT3-204ENST00000518140 SDC4P31431 198 aa24.46■■□□□ 1.51
SLIT3-204ENST00000518140 ATXN1P54253 815 aaKnown RBP24.46■■□□□ 1.51
SLIT3-204ENST00000518140 ODF2Q5BJF6 829 aa24.46■■□□□ 1.51
SLIT3-204ENST00000518140 TFDP3Q5H9I0 405 aa24.46■■□□□ 1.51
SLIT3-204ENST00000518140 DUPD1Q68J44 220 aa24.46■■□□□ 1.51
SLIT3-204ENST00000518140 ABI1Q8IZP0 508 aa24.46■■□□□ 1.51
SLIT3-204ENST00000518140 CMASQ8NFW8 434 aaPredicted RBP24.46■■□□□ 1.51
SLIT3-204ENST00000518140 KCTD13Q8WZ19 329 aa24.46■■□□□ 1.51
SLIT3-204ENST00000518140 VWCEQ96DN2 955 aa24.46■■□□□ 1.51
SLIT3-204ENST00000518140 TOX2Q96NM4 488 aa24.46■■□□□ 1.51
SLIT3-204ENST00000518140 PCDHB8Q9UN66 801 aa24.46■■□□□ 1.51
SLIT3-204ENST00000518140 BDNFP23560 247 aa24.45■■□□□ 1.5
SLIT3-204ENST00000518140 TKTL1P51854 596 aa24.45■■□□□ 1.5
SLIT3-204ENST00000518140 HDAC4P56524 1084 aa24.45■■□□□ 1.5
SLIT3-204ENST00000518140 SCYL2Q6P3W7 929 aa24.45■■□□□ 1.5
SLIT3-204ENST00000518140 MAIP1Q8WWC4 291 aa24.45■■□□□ 1.5
SLIT3-204ENST00000518140 APBB2Q92870 758 aa24.45■■□□□ 1.5
SLIT3-204ENST00000518140 C11orf84Q9BUA3 381 aaPredicted RBP24.45■■□□□ 1.5
SLIT3-204ENST00000518140 LRRC4Q9HBW1 653 aa24.45■■□□□ 1.5
SLIT3-204ENST00000518140 LRFN2Q9ULH4 789 aa24.45■■□□□ 1.5
SLIT3-204ENST00000518140 TSC2P49815 1807 aa24.45■■□□□ 1.5
SLIT3-204ENST00000518140 FAM187AA6NFU0 413 aa24.44■■□□□ 1.5
SLIT3-204ENST00000518140 HHLA1C9JL84 531 aa24.44■■□□□ 1.5
SLIT3-204ENST00000518140 NRP1O14786 923 aa24.44■■□□□ 1.5
SLIT3-204ENST00000518140 FNTAP49354 379 aa24.44■■□□□ 1.5
SLIT3-204ENST00000518140 TTC3P53804 2025 aa24.44■■□□□ 1.5
SLIT3-204ENST00000518140 EPHB4P54760 987 aa24.44■■□□□ 1.5
SLIT3-204ENST00000518140 MRPS5P82675 430 aaKnown RBP24.44■■□□□ 1.5
SLIT3-204ENST00000518140 HFE2Q6ZVN8 426 aa24.44■■□□□ 1.5
SLIT3-204ENST00000518140 GPATCH2LQ9NWQ4 482 aa24.44■■□□□ 1.5
SLIT3-204ENST00000518140 OR4Q2P0C623 313 aa24.44■■□□□ 1.5
SLIT3-204ENST00000518140 TYMPP19971 482 aa24.44■■□□□ 1.5
SLIT3-204ENST00000518140 COPS2P61201 443 aa24.44■■□□□ 1.5
SLIT3-204ENST00000518140 HLTFQ14527 1009 aaKnown RBP eCLIP24.44■■□□□ 1.5
SLIT3-204ENST00000518140 FBXO46Q6PJ61 603 aaPredicted RBP24.44■■□□□ 1.5
SLIT3-204ENST00000518140 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.44■■□□□ 1.5
SLIT3-204ENST00000518140 KCTD6Q8NC69 237 aa24.44■■□□□ 1.5
SLIT3-204ENST00000518140 SPATA18Q8TC71 538 aa24.44■■□□□ 1.5
SLIT3-204ENST00000518140 SNX24Q9Y343 169 aa24.44■■□□□ 1.5
SLIT3-204ENST00000518140 TMEM189-UBE2V1I3L0A0 370 aa24.43■■□□□ 1.5
SLIT3-204ENST00000518140 TADA2AO75478 443 aa24.43■■□□□ 1.5
SLIT3-204ENST00000518140 PAX3P23760 479 aa24.43■■□□□ 1.5
SLIT3-204ENST00000518140 SCNN1AP37088 669 aa24.43■■□□□ 1.5
SLIT3-204ENST00000518140 PBX3P40426 434 aa24.43■■□□□ 1.5
SLIT3-204ENST00000518140 CETN2P41208 172 aa24.43■■□□□ 1.5
SLIT3-204ENST00000518140 GYS2P54840 703 aa24.43■■□□□ 1.5
SLIT3-204ENST00000518140 YWHAHQ04917 246 aaPredicted RBP24.43■■□□□ 1.5
SLIT3-204ENST00000518140 DEFB106AQ8N104 65 aa24.43■■□□□ 1.5
SLIT3-204ENST00000518140 THEM5Q8N1Q8 247 aa24.43■■□□□ 1.5
SLIT3-204ENST00000518140 FAM149B1Q96BN6 582 aa24.43■■□□□ 1.5
SLIT3-204ENST00000518140 HAUS1Q96CS2 278 aa24.43■■□□□ 1.5
SLIT3-204ENST00000518140 DDX23Q9BUQ8 820 aaKnown RBP24.43■■□□□ 1.5
SLIT3-204ENST00000518140 MAGEB5Q9BZ81 275 aa24.43■■□□□ 1.5
SLIT3-204ENST00000518140 ULBP1Q9BZM6 244 aa24.43■■□□□ 1.5
SLIT3-204ENST00000518140 SAE1Q9UBE0 346 aaPredicted RBP24.43■■□□□ 1.5
SLIT3-204ENST00000518140 TBX21Q9UL17 535 aa24.43■■□□□ 1.5
SLIT3-204ENST00000518140 PTPN7P35236 360 aa24.42■■□□□ 1.5
SLIT3-204ENST00000518140 PITX1P78337 314 aaPredicted RBP24.42■■□□□ 1.5
SLIT3-204ENST00000518140 MMRN1Q13201 1228 aa24.42■■□□□ 1.5
SLIT3-204ENST00000518140 CUL1Q13616 776 aa24.42■■□□□ 1.5
SLIT3-204ENST00000518140 TAZQ16635 292 aa24.42■■□□□ 1.5
SLIT3-204ENST00000518140 EFHC1Q5JVL4 640 aa24.42■■□□□ 1.5
SLIT3-204ENST00000518140 CENPIQ92674 756 aaPredicted RBP24.42■■□□□ 1.5
SLIT3-204ENST00000518140 SMARCD1Q96GM5 515 aa24.42■■□□□ 1.5
SLIT3-204ENST00000518140 B3GALT6Q96L58 329 aa24.42■■□□□ 1.5
SLIT3-204ENST00000518140 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.42■■□□□ 1.5
SLIT3-204ENST00000518140 PRPSAP2O60256 369 aa24.42■■□□□ 1.5
SLIT3-204ENST00000518140 TJP3O95049 919 aa24.42■■□□□ 1.5
SLIT3-204ENST00000518140 PTPN9P43378 593 aa24.42■■□□□ 1.5
SLIT3-204ENST00000518140 DYNLT1P63172 113 aa24.42■■□□□ 1.5
SLIT3-204ENST00000518140 CCNG2Q16589 344 aa24.42■■□□□ 1.5
SLIT3-204ENST00000518140 ZC3H12AQ5D1E8 599 aaKnown RBP24.42■■□□□ 1.5
SLIT3-204ENST00000518140 EMBQ6PCB8 327 aa24.42■■□□□ 1.5
SLIT3-204ENST00000518140 SIX6OS1Q8N1H7 587 aa24.42■■□□□ 1.5
SLIT3-204ENST00000518140 TSEN2Q8NCE0 465 aaKnown RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms