RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 TAF1DQ9H5J8 278 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 HESX1Q9UBX0 185 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 LPAR3Q9UBY5 353 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 HS3ST4Q9Y661 456 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 GPR42O15529 346 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 GJB3O75712 270 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 HSPA4LO95757 839 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 APOA4P06727 396 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 ITGA2BP08514 1039 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 CLTBP09497 229 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 INHBBP09529 407 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 FAM200BP0CF97 657 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 GNAT2P19087 354 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 BTF3P20290 206 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 GCSHP23434 173 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 CFPP27918 469 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 ATICP31939 592 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 CNR2P34972 360 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 CCR9P51686 369 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 POU6F2P78424 691 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 IFI35P80217 286 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 FAM102AQ5T9C2 384 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 SNX30Q5VWJ9 437 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 SLFN13Q68D06 897 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 PLBD1Q6P4A8 553 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 KCTD20Q7Z5Y7 419 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 PLEKHH3Q7Z736 793 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 ZNF280BQ86YH2 543 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 CCDC117Q8IWD4 279 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 CFAP52Q8N1V2 620 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 NGEFQ8N5V2 710 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 KCNG4Q8TDN1 519 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 ZNF483Q8TF39 744 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 SNX21Q969T3 373 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 MESP1Q9BRJ9 268 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 SSBP3Q9BWW4 388 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 TEX101Q9BY14 249 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 RNPEPQ9H4A4 650 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 SEPSECSQ9HD40 501 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 POGKQ9P215 609 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 HDAC5Q9UQL6 1122 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 CDYLQ9Y232 598 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 ATP11BQ9Y2G3 1177 aa6.32□□□□□ -1.4
CTNNA1-202ENST00000517533 AATKQ6ZMQ8 1374 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 CCDC196A0A1B0GTZ2 297 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 GTPBP10A4D1E9 387 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 TRIM64A6NGJ6 449 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 TRIM64BA6NI03 449 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 H7C4K7 107 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 RAD17O75943 681 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 USP1O94782 785 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 ACTL6BO94805 426 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 MLYCDO95822 493 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 RPS19P39019 145 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 CCT4P50991 539 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 ZNF134P52741 427 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 SNX16P57768 344 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 ACTR2P61160 394 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 ARF3P61204 181 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 ARF1P84077 181 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 NPY5RQ15761 445 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 MAP3K21Q5TCX8 1036 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 FAM160B1Q5W0V3 765 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 MFSD5Q6N075 450 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 Q6ZSN1 163 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 BBS12Q6ZW61 710 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 RRAGAQ7L523 313 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 LIMS2Q7Z4I7 341 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 R3HCC1LQ7Z5L2 792 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 AFAP1L1Q8TED9 768 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 SPSB4Q96A44 273 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 NSUN4Q96CB9 384 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 FMNL2Q96PY5 1086 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 MXD3Q9BW11 206 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 MAGEB5Q9BZ81 275 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 MSL2Q9HCI7 577 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 PRDM8Q9NQV8 689 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 CTTNBP2NLQ9P2B4 639 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 ZNF212Q9UDV6 495 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 RGS17Q9UGC6 210 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 PCDHGB4Q9UN71 923 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 SLC30A1Q9Y6M5 507 aa6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 TDRD9Q8NDG6 1382 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-202ENST00000517533 hCG_1807616A0A1W2PRN6 198 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 C19orf81C9J6K1 198 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 ZNF185O15231 689 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 RASSF9O75901 435 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 TMEM63AO94886 807 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 ZFPL1O95159 310 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 CHEK2O96017 543 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 TK1P04183 234 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 HNRNPCP07910 306 aaKnown RBP eCLIP6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 CSF1P09603 554 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 CKBP12277 381 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 CHMP24386 653 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 IL1R2P27930 398 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 ABCD3P28288 659 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 AARSP49588 968 aaKnown RBP eCLIP6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 MC2RQ01718 297 aa6.3□□□□□ -1.4
CTNNA1-202ENST00000517533 TMTC4Q5T4D3 741 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms