RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 CCDC172P0C7W6 258 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 CSH1P0DML2 217 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 CSH2P0DML3 217 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 LCP1P13796 627 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 GJA1P17302 382 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 HOXB8P17481 243 aaPredicted RBP10.41□□□□□ -0.74
CLN8-202ENST00000517514 ANXA13P27216 316 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 TKTL1P51854 596 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 EPHB3P54753 998 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 DAOAP59103 153 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 GFPT1Q06210 699 aaPredicted RBP10.41□□□□□ -0.74
CLN8-202ENST00000517514 ADIGQ0VDE8 80 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 PLD1Q13393 1074 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 TAF5Q15542 800 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 CLUL1Q15846 466 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 CYP4A22Q5TCH4 519 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 ACAD10Q6JQN1 1059 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 TRIM72Q6ZMU5 477 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 MMS22LQ6ZRQ5 1243 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 XYLT1Q86Y38 959 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 SCML4Q8N228 414 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 ITFG1Q8TB96 612 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 SHKBP1Q8TBC3 707 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 SMG7Q92540 1137 aaKnown RBP10.41□□□□□ -0.74
CLN8-202ENST00000517514 PPP1R13BQ96KQ4 1090 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 CORO1BQ9BR76 489 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 KCNF1Q9H3M0 494 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 AVENQ9NQS1 362 aaPredicted RBP10.41□□□□□ -0.74
CLN8-202ENST00000517514 SPTLC3Q9NUV7 552 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 COMMD8Q9NX08 183 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 GMIPQ9P107 970 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 MAGED2Q9UNF1 606 aaPredicted RBP10.41□□□□□ -0.74
CLN8-202ENST00000517514 SCML2Q9UQR0 700 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 REXO2Q9Y3B8 237 aaKnown RBP10.41□□□□□ -0.74
CLN8-202ENST00000517514 YJEFN3A6XGL0 299 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 TMCO5BA8MYB1 307 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 E7ENQ6 273 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 RTN3O95197 1032 aaPredicted RBP10.4□□□□□ -0.74
CLN8-202ENST00000517514 LCA5LO95447 670 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 GJB6O95452 261 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 USP17L7P0C7H9 530 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 GZMAP12544 262 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 PTPN2P17706 415 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 YWHAQP27348 245 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 CCZ1BP86790 482 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 CCZ1P86791 482 aaPredicted RBP10.4□□□□□ -0.74
CLN8-202ENST00000517514 IFRD2Q12894 506 aaPredicted RBP10.4□□□□□ -0.74
CLN8-202ENST00000517514 TAF10Q12962 218 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 SLC18A3Q16572 532 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 STXBP5Q5T5C0 1151 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 SNX30Q5VWJ9 437 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 TRNP1Q6NT89 227 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 OLFML1Q6UWY5 402 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 FAM183BPQ6ZVS7 135 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 LRRC8AQ8IWT6 810 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 SCUBE3Q8IX30 993 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 MCOLN2Q8IZK6 566 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 MAFAQ8NHW3 353 aaPredicted RBP10.4□□□□□ -0.74
CLN8-202ENST00000517514 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.4□□□□□ -0.74
CLN8-202ENST00000517514 MCRS1Q96EZ8 462 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 ZNF512Q96ME7 567 aaPredicted RBP10.4□□□□□ -0.74
CLN8-202ENST00000517514 C11orf70Q9BRQ4 267 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 PACSIN1Q9BY11 444 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 ADAM33Q9BZ11 813 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 MIS12Q9H081 205 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 ST7Q9NRC1 585 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 CHORDC1Q9UHD1 332 aaPredicted RBP10.4□□□□□ -0.74
CLN8-202ENST00000517514 DPP7Q9UHL4 492 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 CD207Q9UJ71 328 aa10.4□□□□□ -0.74
CLN8-202ENST00000517514 KIF26AQ9ULI4 1882 aaPredicted RBP10.4□□□□□ -0.75
CLN8-202ENST00000517514 A0A0U1RQJ8 604 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 A0A1W2PQH9 124 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 ZNF840PA6NDX5 716 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 MBTPS2O43462 519 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 XYLBO75191 536 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 RTN2O75298 545 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 ZBED1O96006 694 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 FTLP02792 175 aaPredicted RBP10.39□□□□□ -0.75
CLN8-202ENST00000517514 MYL4P12829 197 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 CEBPBP17676 345 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 KCNA5P22460 613 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 GABRR2P28476 465 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 ACADSBP45954 432 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 GSCP56915 257 aaPredicted RBP10.39□□□□□ -0.75
CLN8-202ENST00000517514 GSDMDP57764 484 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 MRPS5P82675 430 aaKnown RBP10.39□□□□□ -0.75
CLN8-202ENST00000517514 CYP4F8P98187 520 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 TFF2Q03403 129 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 ITIH3Q06033 890 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 VEPH1Q14D04 833 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 PPP1R15BQ5SWA1 713 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 CYP26C1Q6V0L0 522 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 EP400NLQ6ZTU2 488 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 PHLDB2Q86SQ0 1253 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 ITIH5Q86UX2 942 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 ERICH1Q86X53 443 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 TMTC1Q8IUR5 882 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 ATRIPQ8WXE1 791 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 FBXO32Q969P5 355 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 C18orf8Q96DM3 657 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms