RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 RUNX3Q13761 415 aa13.5□□□□□ -0.25
CLCN3-210ENST00000515420 TPD52L1Q16890 204 aaPredicted RBP13.5□□□□□ -0.25
CLCN3-210ENST00000515420 SGO2Q562F6 1265 aa13.5□□□□□ -0.25
CLCN3-210ENST00000515420 IRF2BP1Q8IU81 584 aa13.5□□□□□ -0.25
CLCN3-210ENST00000515420 GPIHBP1Q8IV16 184 aa13.5□□□□□ -0.25
CLCN3-210ENST00000515420 ZNF687Q8N1G0 1237 aa13.5□□□□□ -0.25
CLCN3-210ENST00000515420 PPM1KQ8N3J5 372 aa13.5□□□□□ -0.25
CLCN3-210ENST00000515420 ANKRD52Q8NB46 1076 aa13.5□□□□□ -0.25
CLCN3-210ENST00000515420 GPT2Q8TD30 523 aa13.5□□□□□ -0.25
CLCN3-210ENST00000515420 SH3RF2Q8TEC5 729 aa13.5□□□□□ -0.25
CLCN3-210ENST00000515420 OSCP1Q8WVF1 389 aa13.5□□□□□ -0.25
CLCN3-210ENST00000515420 FAM3CQ92520 227 aa13.5□□□□□ -0.25
CLCN3-210ENST00000515420 TLR8Q9NR97 1041 aaKnown RBP13.5□□□□□ -0.25
CLCN3-210ENST00000515420 GKN1Q9NS71 199 aa13.5□□□□□ -0.25
CLCN3-210ENST00000515420 SCML2Q9UQR0 700 aa13.5□□□□□ -0.25
CLCN3-210ENST00000515420 SPECC1L-ADORA2AF8WAN1 911 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 DCNP07585 359 aaKnown RBP13.49□□□□□ -0.25
CLCN3-210ENST00000515420 VDRP11473 427 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 ACO1P21399 889 aaKnown RBP13.49□□□□□ -0.25
CLCN3-210ENST00000515420 CD72P21854 359 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 PSEN1P49768 467 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 KIF11P52732 1056 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 BCAT1P54687 386 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 AMPD2Q01433 879 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 LRMPQ12912 555 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 STILQ15468 1287 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 HECTD3Q5T447 861 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 MAMSTRQ6ZN01 415 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 ENOSF1Q7L5Y1 443 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 CCDC186Q7Z3E2 898 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 CPA6Q8N4T0 437 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 ZNF276Q8N554 614 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 RIN3Q8TB24 985 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 ATP2A3Q93084 1043 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 ZFYVE19Q96K21 471 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 RNF38Q9H0F5 515 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 INTS2Q9H0H0 1204 aaKnown RBP13.49□□□□□ -0.25
CLCN3-210ENST00000515420 CYLDQ9NQC7 956 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 HPS4Q9NQG7 708 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 GTSE1Q9NYZ3 720 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 GMIPQ9P107 970 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 HESX1Q9UBX0 185 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 MTF2Q9Y483 593 aaPredicted RBP13.49□□□□□ -0.25
CLCN3-210ENST00000515420 USP3Q9Y6I4 520 aa13.49□□□□□ -0.25
CLCN3-210ENST00000515420 CACNA1IQ9P0X4 2223 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 LEFTY2O00292 366 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 SLC9A3R1O14745 358 aaPredicted RBP13.48□□□□□ -0.25
CLCN3-210ENST00000515420 COCHO43405 550 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 ABL1P00519 1130 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 IFNAR2P48551 515 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 TNK2Q07912 1038 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 BST2Q10589 180 aaKnown RBP13.48□□□□□ -0.25
CLCN3-210ENST00000515420 FZD5Q13467 585 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 ANGPT1Q15389 498 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 MAN2A1Q16706 1144 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 RAB41Q5JT25 222 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 KLHDC10Q6PID8 442 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 TRIM65Q6PJ69 517 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 TMEM270Q6UE05 265 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 GPRIN1Q7Z2K8 1008 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 C1orf210Q8IVY1 113 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 EXOC4Q96A65 974 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 CHRDQ9H2X0 955 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 DUS2Q9NX74 493 aaKnown RBP13.48□□□□□ -0.25
CLCN3-210ENST00000515420 CHORDC1Q9UHD1 332 aaPredicted RBP13.48□□□□□ -0.25
CLCN3-210ENST00000515420 TSPAN16Q9UKR8 245 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 CNTN6Q9UQ52 1028 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 CPQQ9Y646 472 aa13.48□□□□□ -0.25
CLCN3-210ENST00000515420 FANCMQ8IYD8 2048 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 E2F8A0AVK6 867 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 O00370 1275 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 XPO1O14980 1071 aaKnown RBP13.47□□□□□ -0.25
CLCN3-210ENST00000515420 NFATC1O95644 943 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 SETSIPP0DME0 302 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 MBL2P11226 248 aaPredicted RBP13.47□□□□□ -0.25
CLCN3-210ENST00000515420 CD19P15391 556 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 MTIF2P46199 727 aaKnown RBP13.47□□□□□ -0.25
CLCN3-210ENST00000515420 ZNF132P52740 706 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 ZXDBP98169 803 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 NR1H3Q13133 447 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 LRRC32Q14392 662 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 MEA1Q16626 185 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 EXOC3L4Q17RC7 722 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 GOLGA7BQ2TAP0 167 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 EML3Q32P44 896 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 DGKKQ5KSL6 1271 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 LCLAT1Q6UWP7 414 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 GBP6Q6ZN66 633 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 TADA2BQ86TJ2 420 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 TTC30AQ86WT1 665 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 ARHGEF19Q8IW93 802 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 SCML4Q8N228 414 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 SYNPOQ8N3V7 929 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 OTUB2Q96DC9 234 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 ZFRQ96KR1 1074 aaKnown RBP13.47□□□□□ -0.25
CLCN3-210ENST00000515420 CDK5RAP1Q96SZ6 601 aaKnown RBP13.47□□□□□ -0.25
CLCN3-210ENST00000515420 EBF3Q9H4W6 596 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 ECT2Q9H8V3 914 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 CLIC5Q9NZA1 410 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 TBC1D14Q9P2M4 693 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms