RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 MMS22LQ6ZRQ5 1243 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 ZDHHC17Q8IUH5 632 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 STKLD1Q8NE28 680 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 TRIM11Q96F44 468 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 EIF3CQ99613 913 aaKnown RBP22.08■■□□□ 1.13
LSM6-207ENST00000515311 CLDND1Q9NY35 253 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 ADAM22Q9P0K1 906 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 CLEC1BQ9P126 229 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 UXTQ9UBK9 157 aaPredicted RBP22.08■■□□□ 1.13
LSM6-207ENST00000515311 SCML2Q9UQR0 700 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 C2orf16Q68DN1 1984 aa22.08■■□□□ 1.12
LSM6-207ENST00000515311 TMCO5BA8MYB1 307 aa22.07■■□□□ 1.12
LSM6-207ENST00000515311 SART1O43290 800 aaKnown RBP22.07■■□□□ 1.12
LSM6-207ENST00000515311 TBX10O75333 385 aa22.07■■□□□ 1.12
LSM6-207ENST00000515311 IPO7O95373 1038 aaKnown RBP22.07■■□□□ 1.12
LSM6-207ENST00000515311 ZBED1O96006 694 aa22.07■■□□□ 1.12
LSM6-207ENST00000515311 LCP1P13796 627 aa22.07■■□□□ 1.12
LSM6-207ENST00000515311 EPHA5P54756 1037 aa22.07■■□□□ 1.12
LSM6-207ENST00000515311 GSCP56915 257 aaPredicted RBP22.07■■□□□ 1.12
LSM6-207ENST00000515311 MTF1Q14872 753 aa22.07■■□□□ 1.12
LSM6-207ENST00000515311 SYCE2Q6PIF2 218 aa22.07■■□□□ 1.12
LSM6-207ENST00000515311 MCOLN2Q8IZK6 566 aa22.07■■□□□ 1.12
LSM6-207ENST00000515311 LEMD2Q8NC56 503 aa22.07■■□□□ 1.12
LSM6-207ENST00000515311 OVCA2Q8WZ82 227 aa22.07■■□□□ 1.12
LSM6-207ENST00000515311 IRGQQ8WZA9 623 aa22.07■■□□□ 1.12
LSM6-207ENST00000515311 C11orf70Q9BRQ4 267 aa22.07■■□□□ 1.12
LSM6-207ENST00000515311 ULBP1Q9BZM6 244 aa22.07■■□□□ 1.12
LSM6-207ENST00000515311 OBSL1O75147 1896 aa22.07■■□□□ 1.12
LSM6-207ENST00000515311 PIK3R2O00459 728 aa22.06■■□□□ 1.12
LSM6-207ENST00000515311 ZNF263O14978 683 aa22.06■■□□□ 1.12
LSM6-207ENST00000515311 PAPSS1O43252 624 aaPredicted RBP22.06■■□□□ 1.12
LSM6-207ENST00000515311 FGF19O95750 216 aa22.06■■□□□ 1.12
LSM6-207ENST00000515311 MYBL1P10243 752 aa22.06■■□□□ 1.12
LSM6-207ENST00000515311 PTPN2P17706 415 aa22.06■■□□□ 1.12
LSM6-207ENST00000515311 LTBRP36941 435 aa22.06■■□□□ 1.12
LSM6-207ENST00000515311 SPA17Q15506 151 aa22.06■■□□□ 1.12
LSM6-207ENST00000515311 SCUBE3Q8IX30 993 aa22.06■■□□□ 1.12
LSM6-207ENST00000515311 C12orf76Q8N812 135 aaPredicted RBP22.06■■□□□ 1.12
LSM6-207ENST00000515311 SLITRK1Q96PX8 696 aa22.06■■□□□ 1.12
LSM6-207ENST00000515311 LRRC3Q9BY71 257 aa22.06■■□□□ 1.12
LSM6-207ENST00000515311 LUC7LQ9NQ29 371 aaKnown RBP22.06■■□□□ 1.12
LSM6-207ENST00000515311 ASAH2Q9NR71 780 aa22.06■■□□□ 1.12
LSM6-207ENST00000515311 WDR35Q9P2L0 1181 aa22.06■■□□□ 1.12
LSM6-207ENST00000515311 TJP2Q9UDY2 1190 aa22.06■■□□□ 1.12
LSM6-207ENST00000515311 MAGED2Q9UNF1 606 aaPredicted RBP22.06■■□□□ 1.12
LSM6-207ENST00000515311 DENND4CQ5VZ89 1909 aa22.06■■□□□ 1.12
LSM6-207ENST00000515311 USP17L7P0C7H9 530 aa22.05■■□□□ 1.12
LSM6-207ENST00000515311 SCNN1AP37088 669 aa22.05■■□□□ 1.12
LSM6-207ENST00000515311 PPP3CCP48454 512 aa22.05■■□□□ 1.12
LSM6-207ENST00000515311 DAOAP59103 153 aa22.05■■□□□ 1.12
LSM6-207ENST00000515311 MRPS5P82675 430 aaKnown RBP22.05■■□□□ 1.12
LSM6-207ENST00000515311 ITIH3Q06033 890 aa22.05■■□□□ 1.12
LSM6-207ENST00000515311 IFRD2Q12894 506 aaPredicted RBP22.05■■□□□ 1.12
LSM6-207ENST00000515311 ZNF268Q14587 947 aaPredicted RBP22.05■■□□□ 1.12
LSM6-207ENST00000515311 RARS2Q5T160 578 aaKnown RBP22.05■■□□□ 1.12
LSM6-207ENST00000515311 CYP4A22Q5TCH4 519 aa22.05■■□□□ 1.12
LSM6-207ENST00000515311 TMC5Q6UXY8 1006 aa22.05■■□□□ 1.12
LSM6-207ENST00000515311 TOGARAM2Q6ZUX3 1019 aa22.05■■□□□ 1.12
LSM6-207ENST00000515311 GPR149Q86SP6 731 aa22.05■■□□□ 1.12
LSM6-207ENST00000515311 XYLT1Q86Y38 959 aa22.05■■□□□ 1.12
LSM6-207ENST00000515311 TMC8Q8IU68 726 aa22.05■■□□□ 1.12
LSM6-207ENST00000515311 PDZD8Q8NEN9 1154 aa22.05■■□□□ 1.12
LSM6-207ENST00000515311 SMG7Q92540 1137 aaKnown RBP22.05■■□□□ 1.12
LSM6-207ENST00000515311 FBXO32Q969P5 355 aa22.05■■□□□ 1.12
LSM6-207ENST00000515311 MSLNLQ96KJ4 702 aa22.05■■□□□ 1.12
LSM6-207ENST00000515311 CORO1BQ9BR76 489 aa22.05■■□□□ 1.12
LSM6-207ENST00000515311 AVENQ9NQS1 362 aaPredicted RBP22.05■■□□□ 1.12
LSM6-207ENST00000515311 ANKRD62A6NC57 917 aa22.04■■□□□ 1.12
LSM6-207ENST00000515311 DLX2Q07687 328 aaPredicted RBP22.04■■□□□ 1.12
LSM6-207ENST00000515311 TAF10Q12962 218 aa22.04■■□□□ 1.12
LSM6-207ENST00000515311 C2CD6Q53TS8 623 aa22.04■■□□□ 1.12
LSM6-207ENST00000515311 OLFML1Q6UWY5 402 aa22.04■■□□□ 1.12
LSM6-207ENST00000515311 FAM183BPQ6ZVS7 135 aa22.04■■□□□ 1.12
LSM6-207ENST00000515311 BHLHA9Q7RTU4 235 aa22.04■■□□□ 1.12
LSM6-207ENST00000515311 MON1AQ86VX9 555 aa22.04■■□□□ 1.12
LSM6-207ENST00000515311 ARHGAP18Q8N392 663 aa22.04■■□□□ 1.12
LSM6-207ENST00000515311 MCRS1Q96EZ8 462 aa22.04■■□□□ 1.12
LSM6-207ENST00000515311 ADAM7Q9H2U9 754 aa22.04■■□□□ 1.12
LSM6-207ENST00000515311 PIDD1Q9HB75 910 aa22.04■■□□□ 1.12
LSM6-207ENST00000515311 ZNF334Q9HCZ1 680 aaPredicted RBP22.04■■□□□ 1.12
LSM6-207ENST00000515311 DNMT3BQ9UBC3 853 aaKnown RBP22.04■■□□□ 1.12
LSM6-207ENST00000515311 INTUQ9ULD6 942 aa22.04■■□□□ 1.12
LSM6-207ENST00000515311 NOTCH4Q99466 2003 aa22.04■■□□□ 1.12
LSM6-207ENST00000515311 FAM170AA1A519 330 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 GLI1P08151 1106 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 H2AFZP0C0S5 128 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 PSEN1P49768 467 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 GALCP54803 685 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 SLC6A3Q01959 620 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 PABPC1LQ4VXU2 614 aaKnown RBP22.03■■□□□ 1.12
LSM6-207ENST00000515311 EFHC1Q5JVL4 640 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 SNX30Q5VWJ9 437 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 OR6B2Q6IFH4 312 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 H2AFVQ71UI9 128 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 SLC26A9Q7LBE3 791 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 C3orf20Q8ND61 904 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 TRIM62Q9BVG3 475 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 S1PR5Q9H228 398 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 KCNF1Q9H3M0 494 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 IL21Q9HBE4 155 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms