RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 STAT1P42224 750 aa15.03■□□□□ -0
NUP54-216ENST00000514901 JAM2P57087 298 aa15.03■□□□□ -0
NUP54-216ENST00000514901 ZNF268Q14587 947 aaPredicted RBP15.03■□□□□ -0
NUP54-216ENST00000514901 HECTD3Q5T447 861 aa15.03■□□□□ -0
NUP54-216ENST00000514901 STXBP5Q5T5C0 1151 aa15.03■□□□□ -0
NUP54-216ENST00000514901 TANGO2Q6ICL3 276 aa15.03■□□□□ -0
NUP54-216ENST00000514901 GPRIN1Q7Z2K8 1008 aa15.03■□□□□ -0
NUP54-216ENST00000514901 CCDC186Q7Z3E2 898 aa15.03■□□□□ -0
NUP54-216ENST00000514901 CACNA2D4Q7Z3S7 1137 aa15.03■□□□□ -0
NUP54-216ENST00000514901 SCML4Q8N228 414 aa15.03■□□□□ -0
NUP54-216ENST00000514901 ARHGAP18Q8N392 663 aa15.03■□□□□ -0
NUP54-216ENST00000514901 CELF5Q8N6W0 485 aaKnown RBP15.03■□□□□ -0
NUP54-216ENST00000514901 DEPDC1BQ8WUY9 529 aa15.03■□□□□ -0
NUP54-216ENST00000514901 SECISBP2LQ93073 1101 aaKnown RBP15.03■□□□□ -0
NUP54-216ENST00000514901 NUP58Q9BVL2 599 aa15.03■□□□□ -0
NUP54-216ENST00000514901 LHX5Q9H2C1 402 aa15.03■□□□□ -0
NUP54-216ENST00000514901 KIF9Q9HAQ2 790 aa15.03■□□□□ -0
NUP54-216ENST00000514901 TRPC7Q9HCX4 862 aa15.03■□□□□ -0
NUP54-216ENST00000514901 NLRC4Q9NPP4 1024 aa15.03■□□□□ -0
NUP54-216ENST00000514901 CYLDQ9NQC7 956 aa15.03■□□□□ -0
NUP54-216ENST00000514901 MUTYHQ9UIF7 546 aa15.03■□□□□ -0
NUP54-216ENST00000514901 MYO6Q9UM54 1294 aa15.03■□□□□ -0
NUP54-216ENST00000514901 PI4K2BG5E9Z4 385 aa15.02■□□□□ -0
NUP54-216ENST00000514901 DLL1O00548 723 aa15.02■□□□□ -0
NUP54-216ENST00000514901 EPHB6O15197 1021 aa15.02■□□□□ -0
NUP54-216ENST00000514901 CBFA2T2O43439 604 aa15.02■□□□□ -0
NUP54-216ENST00000514901 CALCAP01258 141 aa15.02■□□□□ -0
NUP54-216ENST00000514901 CCDC172P0C7W6 258 aa15.02■□□□□ -0
NUP54-216ENST00000514901 CYP11B1P15538 503 aa15.02■□□□□ -0
NUP54-216ENST00000514901 FCARP24071 287 aa15.02■□□□□ -0
NUP54-216ENST00000514901 GPD2P43304 727 aa15.02■□□□□ -0
NUP54-216ENST00000514901 ACADSBP45954 432 aa15.02■□□□□ -0
NUP54-216ENST00000514901 TKTL1P51854 596 aa15.02■□□□□ -0
NUP54-216ENST00000514901 SNX16P57768 344 aa15.02■□□□□ -0
NUP54-216ENST00000514901 PM20D1Q6GTS8 502 aa15.02■□□□□ -0
NUP54-216ENST00000514901 PMF1Q6P1K2 205 aa15.02■□□□□ -0
NUP54-216ENST00000514901 TADA2BQ86TJ2 420 aa15.02■□□□□ -0
NUP54-216ENST00000514901 SLC47A2Q86VL8 602 aa15.02■□□□□ -0
NUP54-216ENST00000514901 ZNF677Q86XU0 584 aa15.02■□□□□ -0
NUP54-216ENST00000514901 MFSD6LQ8IWD5 586 aa15.02■□□□□ -0
NUP54-216ENST00000514901 ZNF276Q8N554 614 aa15.02■□□□□ -0
NUP54-216ENST00000514901 RSAD2Q8WXG1 361 aa15.02■□□□□ -0
NUP54-216ENST00000514901 IQCDQ96DY2 449 aa15.02■□□□□ -0
NUP54-216ENST00000514901 NOX5Q96PH1 765 aa15.02■□□□□ -0
NUP54-216ENST00000514901 CDK5RAP1Q96SZ6 601 aaKnown RBP15.02■□□□□ -0
NUP54-216ENST00000514901 EDEM3Q9BZQ6 932 aa15.02■□□□□ -0
NUP54-216ENST00000514901 ACP6Q9NPH0 428 aa15.02■□□□□ -0
NUP54-216ENST00000514901 CNGB3Q9NQW8 809 aa15.02■□□□□ -0
NUP54-216ENST00000514901 TDP1Q9NUW8 608 aa15.02■□□□□ -0
NUP54-216ENST00000514901 GMIPQ9P107 970 aa15.02■□□□□ -0
NUP54-216ENST00000514901 CEP83Q9Y592 693 aa15.02■□□□□ -0
NUP54-216ENST00000514901 MUC3AQ02505 3323 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 HEPACAM2A8MVW5 462 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 FBXO21O94952 628 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 ZBED1O96006 694 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 OAS1P00973 400 aaKnown RBP15.01□□□□□ -0.01
NUP54-216ENST00000514901 CKMP06732 381 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 PNMA6AP0CW24 399 aaPredicted RBP15.01□□□□□ -0.01
NUP54-216ENST00000514901 RALAP11233 206 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 SRFP11831 508 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 PSMC3P17980 439 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 VIPR2P41587 438 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 RPL34P49207 117 aaKnown RBP15.01□□□□□ -0.01
NUP54-216ENST00000514901 SLC7A9P82251 487 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 ZXDAP98168 799 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 FIGNQ5HY92 759 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 DENND1BQ6P3S1 775 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 SIX6OS1Q8N1H7 587 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 KIAA1958Q8N8K9 716 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 ARL14EPQ8N8R7 260 aaPredicted RBP15.01□□□□□ -0.01
NUP54-216ENST00000514901 RNF214Q8ND24 703 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 EDAQ92838 391 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 KXD1Q9BQD3 176 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 RPP25Q9BUL9 199 aaKnown RBP15.01□□□□□ -0.01
NUP54-216ENST00000514901 TRMT61BQ9BVS5 477 aaKnown RBP15.01□□□□□ -0.01
NUP54-216ENST00000514901 PDCL3Q9H2J4 239 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 THG1LQ9NWX6 298 aaKnown RBP15.01□□□□□ -0.01
NUP54-216ENST00000514901 CLIC5Q9NZA1 410 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 IFNKQ9P0W0 207 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 ARHGAP26Q9UNA1 814 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 DUSP12Q9UNI6 340 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 ANAPC1Q9H1A4 1944 aa15.01□□□□□ -0.01
NUP54-216ENST00000514901 C2orf78A6NCI8 922 aa15□□□□□ -0.01
NUP54-216ENST00000514901 TULP2O00295 520 aa15□□□□□ -0.01
NUP54-216ENST00000514901 GFPT2O94808 682 aa15□□□□□ -0.01
NUP54-216ENST00000514901 OLFM2O95897 454 aa15□□□□□ -0.01
NUP54-216ENST00000514901 TCF3P15923 654 aa15□□□□□ -0.01
NUP54-216ENST00000514901 PFKPQ01813 784 aa15□□□□□ -0.01
NUP54-216ENST00000514901 ADIGQ0VDE8 80 aa15□□□□□ -0.01
NUP54-216ENST00000514901 KLHDC10Q6PID8 442 aa15□□□□□ -0.01
NUP54-216ENST00000514901 YAF2Q8IY57 180 aa15□□□□□ -0.01
NUP54-216ENST00000514901 IRGQQ8WZA9 623 aa15□□□□□ -0.01
NUP54-216ENST00000514901 USP13Q92995 863 aaPredicted RBP15□□□□□ -0.01
NUP54-216ENST00000514901 CYP2S1Q96SQ9 504 aa15□□□□□ -0.01
NUP54-216ENST00000514901 SLC4A5Q9BY07 1137 aa15□□□□□ -0.01
NUP54-216ENST00000514901 PLA2G2FQ9BZM2 168 aa15□□□□□ -0.01
NUP54-216ENST00000514901 ULBP1Q9BZM6 244 aa15□□□□□ -0.01
NUP54-216ENST00000514901 SLC2A4RGQ9NR83 387 aa15□□□□□ -0.01
NUP54-216ENST00000514901 NAGPAQ9UK23 515 aa15□□□□□ -0.01
NUP54-216ENST00000514901 PATJQ8NI35 1801 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms