RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 LAIR1Q6GTX8 287 aa7.73□□□□□ -1.17
USP46-208ENST00000512656 TSSK4Q6SA08 328 aa7.73□□□□□ -1.17
USP46-208ENST00000512656 CCDC73Q6ZRK6 1079 aa7.73□□□□□ -1.17
USP46-208ENST00000512656 GAREM2Q75VX8 874 aa7.73□□□□□ -1.17
USP46-208ENST00000512656 ETFBKMTQ8IXQ9 262 aa7.73□□□□□ -1.17
USP46-208ENST00000512656 SYNPOQ8N3V7 929 aa7.73□□□□□ -1.17
USP46-208ENST00000512656 BPIFB1Q8TDL5 484 aa7.73□□□□□ -1.17
USP46-208ENST00000512656 CACTINQ8WUQ7 758 aaKnown RBP7.73□□□□□ -1.17
USP46-208ENST00000512656 EXOC4Q96A65 974 aa7.73□□□□□ -1.17
USP46-208ENST00000512656 ACCSQ96QU6 501 aa7.73□□□□□ -1.17
USP46-208ENST00000512656 FIZ1Q96SL8 496 aa7.73□□□□□ -1.17
USP46-208ENST00000512656 PYM1Q9BRP8 204 aaKnown RBP7.73□□□□□ -1.17
USP46-208ENST00000512656 ZCWPW1Q9H0M4 648 aa7.73□□□□□ -1.17
USP46-208ENST00000512656 TASP1Q9H6P5 420 aa7.73□□□□□ -1.17
USP46-208ENST00000512656 DLL3Q9NYJ7 618 aa7.73□□□□□ -1.17
USP46-208ENST00000512656 USP18Q9UMW8 372 aa7.73□□□□□ -1.17
USP46-208ENST00000512656 R3HCC1Q9Y3T6 440 aaKnown RBP7.73□□□□□ -1.17
USP46-208ENST00000512656 PCDHB5Q9Y5E4 795 aa7.73□□□□□ -1.17
USP46-208ENST00000512656 SRPRBQ9Y5M8 271 aaKnown RBP7.73□□□□□ -1.17
USP46-208ENST00000512656 PDCD11Q14690 1871 aaKnown RBP7.72□□□□□ -1.17
USP46-208ENST00000512656 SLC38A8A6NNN8 435 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 SPECC1L-ADORA2AF8WAN1 911 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 KIAA0391O15091 583 aaKnown RBP7.72□□□□□ -1.17
USP46-208ENST00000512656 FOXD2O60548 495 aaPredicted RBP7.72□□□□□ -1.17
USP46-208ENST00000512656 MMP20O60882 483 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 LRP3O75074 770 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 PAPSS2O95340 614 aaPredicted RBP7.72□□□□□ -1.17
USP46-208ENST00000512656 GCNT3O95395 438 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 GHRHP01286 108 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 RETP07949 1114 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 CSH1P0DML2 217 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 CSH2P0DML3 217 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 HAPLN1P10915 354 aaPredicted RBP7.72□□□□□ -1.17
USP46-208ENST00000512656 TDGF1P13385 188 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 GARTP22102 1010 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 AVPR1AP37288 418 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 RPL10AP62906 217 aaKnown RBP7.72□□□□□ -1.17
USP46-208ENST00000512656 TFAMQ00059 246 aaKnown RBP7.72□□□□□ -1.17
USP46-208ENST00000512656 AMPD2Q01433 879 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 MYL7Q01449 175 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 GRIN1Q05586 938 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 CUL4AQ13619 759 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 ITPRIPL2Q3MIP1 535 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 STXBP5Q5T5C0 1151 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 L1TD1Q5T7N2 865 aaKnown RBP7.72□□□□□ -1.17
USP46-208ENST00000512656 WSCD1Q658N2 575 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 STXBP4Q6ZWJ1 553 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 DYMQ7RTS9 669 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 SFR1Q86XK3 245 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 SYCP3Q8IZU3 236 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 TMEM86AQ8N2M4 240 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 TMEM130Q8N3G9 435 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 TTC9BQ8N6N2 239 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 OR10T2Q8NGX3 314 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 LRRC15Q8TF66 581 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 STK32AQ8WU08 396 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 MRPS31Q92665 395 aaKnown RBP7.72□□□□□ -1.17
USP46-208ENST00000512656 PLD4Q96BZ4 506 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 RSPRY1Q96DX4 576 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 EPSTI1Q96J88 318 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 TMEM209Q96SK2 561 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 FAM213AQ9BRX8 229 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 LRRC27Q9C0I9 530 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 OLFML3Q9NRN5 406 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 ABI2Q9NYB9 513 aaPredicted RBP7.72□□□□□ -1.17
USP46-208ENST00000512656 UXTQ9UBK9 157 aaPredicted RBP7.72□□□□□ -1.17
USP46-208ENST00000512656 CLIC4Q9Y696 253 aa7.72□□□□□ -1.17
USP46-208ENST00000512656 PATJQ8NI35 1801 aa7.71□□□□□ -1.17
USP46-208ENST00000512656 COL4A3Q01955 1670 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 TISP43B9A030 160 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 EXTL3O43909 919 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 ATG13O75143 517 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 PRPF40AO75400 957 aaKnown RBP7.71□□□□□ -1.18
USP46-208ENST00000512656 SOAT2O75908 522 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 IDEP14735 1019 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 ATF6P18850 670 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 PCSK1P29120 753 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 ADSSP30520 456 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 HOXA6P31267 233 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 STAT6P42226 847 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 CYP4F8P98187 520 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 SATB1Q01826 763 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 GRSF1Q12849 480 aaKnown RBP eCLIP7.71□□□□□ -1.18
USP46-208ENST00000512656 BFSP1Q12934 665 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 SIM2Q14190 667 aaPredicted RBP7.71□□□□□ -1.18
USP46-208ENST00000512656 CC2D1AQ6P1N0 951 aaPredicted RBP7.71□□□□□ -1.18
USP46-208ENST00000512656 CRELD2Q6UXH1 353 aaPredicted RBP7.71□□□□□ -1.18
USP46-208ENST00000512656 PRR23BQ6ZRT6 265 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 USP49Q70CQ1 688 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 LONP2Q86WA8 852 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 BRSK2Q8IWQ3 736 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 CCDC65Q8IXS2 484 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 CMTM8Q8IZV2 173 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 LRRC52Q8N7C0 313 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 SPATA18Q8TC71 538 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 GIPC2Q8TF65 315 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 WFDC12Q8WWY7 111 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 TP53INP1Q96A56 240 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 ACBD6Q9BR61 282 aa7.71□□□□□ -1.18
USP46-208ENST00000512656 MKNK1Q9BUB5 465 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms