RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 TOE1Q96GM8 510 aaKnown RBP9.8□□□□□ -0.84
NUP54-211ENST00000512151 GPR174Q9BXC1 333 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 RNF38Q9H0F5 515 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 BHMT2Q9H2M3 363 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 SMPD4Q9NXE4 827 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 WSB2Q9NYS7 404 aaPredicted RBP9.8□□□□□ -0.84
NUP54-211ENST00000512151 UXTQ9UBK9 157 aaPredicted RBP9.8□□□□□ -0.84
NUP54-211ENST00000512151 NXF1Q9UBU9 619 aaKnown RBP9.8□□□□□ -0.84
NUP54-211ENST00000512151 SNX11Q9Y5W9 270 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 NBPF19A0A087WUL8 3843 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 ANO9A1A5B4 782 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 KCNJ18B7U540 433 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 FAM189A1O60320 539 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 NEMFO60524 1076 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 HIP1RO75146 1068 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 NFICP08651 508 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 RPA1P27694 616 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 CD6P30203 668 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 SMARCB1Q12824 385 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 RABEP1Q15276 862 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 KCNT1Q5JUK3 1230 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 C10orf76Q5T2E6 689 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 JADE1Q6IE81 842 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 IL27RAQ6UWB1 636 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 LAYNQ6UX15 382 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 KIAA1324Q6UXG2 1013 aaKnown RBP9.79□□□□□ -0.84
NUP54-211ENST00000512151 DCP1BQ8IZD4 617 aaKnown RBP9.79□□□□□ -0.84
NUP54-211ENST00000512151 NAF1Q96HR8 494 aaKnown RBP9.79□□□□□ -0.84
NUP54-211ENST00000512151 PKMYT1Q99640 499 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 PYM1Q9BRP8 204 aaKnown RBP9.79□□□□□ -0.84
NUP54-211ENST00000512151 NRSN2Q9GZP1 204 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 KMT5AQ9NQR1 393 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 CFAP97Q9P2B7 532 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 ANKMY1Q9P2S6 941 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 EIF2B4Q9UI10 523 aaKnown RBP9.79□□□□□ -0.84
NUP54-211ENST00000512151 NFE2L3Q9Y4A8 694 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 FLNCQ14315 2725 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 NUMA1Q14980 2115 aa9.79□□□□□ -0.84
NUP54-211ENST00000512151 TCHHQ07283 1943 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 HCRTO43612 131 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 TULP3O75386 442 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 ADH1CP00326 375 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 ADRB2P07550 413 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 ADSSP30520 456 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 GRK6P43250 576 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 USP46P62068 366 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 IL9RQ01113 521 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 PPP2R3AQ06190 1150 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 STK3Q13188 491 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 DNAJC3Q13217 504 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 SF3A1Q15459 793 aaKnown RBP9.78□□□□□ -0.84
NUP54-211ENST00000512151 TBC1D25Q3MII6 688 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 HES3Q5TGS1 186 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 TRMT11Q7Z4G4 463 aaKnown RBP9.78□□□□□ -0.84
NUP54-211ENST00000512151 METTL23Q86XA0 190 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 THEM5Q8N1Q8 247 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 TERB1Q8NA31 727 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 KCNV2Q8TDN2 545 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 MED8Q96G25 268 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 IPO9Q96P70 1041 aaKnown RBP9.78□□□□□ -0.84
NUP54-211ENST00000512151 GABRG3Q99928 467 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 DSEQ9UL01 958 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 CPQQ9Y646 472 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 LRRK2Q5S007 2527 aa9.78□□□□□ -0.84
NUP54-211ENST00000512151 SFI1A8K8P3 1242 aa9.77□□□□□ -0.84
NUP54-211ENST00000512151 METTL12A8MUP2 240 aa9.77□□□□□ -0.84
NUP54-211ENST00000512151 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.77□□□□□ -0.84
NUP54-211ENST00000512151 WASH3PC4AMC7 463 aa9.77□□□□□ -0.84
NUP54-211ENST00000512151 H0Y8X5 98 aa9.77□□□□□ -0.84
NUP54-211ENST00000512151 TERTO14746 1132 aaKnown RBP9.77□□□□□ -0.84
NUP54-211ENST00000512151 CPLX1O14810 134 aa9.77□□□□□ -0.84
NUP54-211ENST00000512151 ACAT1P24752 427 aaKnown RBP9.77□□□□□ -0.84
NUP54-211ENST00000512151 HNF1BP35680 557 aa9.77□□□□□ -0.84
NUP54-211ENST00000512151 EMP3P54852 163 aa9.77□□□□□ -0.84
NUP54-211ENST00000512151 RPL10AP62906 217 aaKnown RBP9.77□□□□□ -0.84
NUP54-211ENST00000512151 SLC7A9P82251 487 aa9.77□□□□□ -0.84
NUP54-211ENST00000512151 PDIA5Q14554 519 aa9.77□□□□□ -0.84
NUP54-211ENST00000512151 SUZ12Q15022 739 aaKnown RBP9.77□□□□□ -0.84
NUP54-211ENST00000512151 FBXL19Q6PCT2 694 aa9.77□□□□□ -0.84
NUP54-211ENST00000512151 LEO1Q8WVC0 666 aaPredicted RBP9.77□□□□□ -0.84
NUP54-211ENST00000512151 SPIRE2Q8WWL2 714 aa9.77□□□□□ -0.84
NUP54-211ENST00000512151 RNF166Q96A37 237 aaPredicted RBP9.77□□□□□ -0.84
NUP54-211ENST00000512151 ZFRQ96KR1 1074 aaKnown RBP9.77□□□□□ -0.84
NUP54-211ENST00000512151 RUSC1Q9BVN2 902 aa9.77□□□□□ -0.84
NUP54-211ENST00000512151 TRIM9Q9C026 710 aa9.77□□□□□ -0.84
NUP54-211ENST00000512151 USP36Q9P275 1121 aaKnown RBP9.77□□□□□ -0.84
NUP54-211ENST00000512151 FTSJ1Q9UET6 329 aa9.77□□□□□ -0.84
NUP54-211ENST00000512151 PRRT4C9JH25 899 aa9.76□□□□□ -0.85
NUP54-211ENST00000512151 ENC1O14682 589 aa9.76□□□□□ -0.85
NUP54-211ENST00000512151 SLC9A3R1O14745 358 aaPredicted RBP9.76□□□□□ -0.85
NUP54-211ENST00000512151 CLDN3O15551 220 aa9.76□□□□□ -0.85
NUP54-211ENST00000512151 TRAK2O60296 914 aa9.76□□□□□ -0.85
NUP54-211ENST00000512151 PCDHGA12O60330 932 aa9.76□□□□□ -0.85
NUP54-211ENST00000512151 OLFM2O95897 454 aa9.76□□□□□ -0.85
NUP54-211ENST00000512151 ST3GAL1Q11201 340 aa9.76□□□□□ -0.85
NUP54-211ENST00000512151 SCARA3Q6AZY7 606 aa9.76□□□□□ -0.85
NUP54-211ENST00000512151 OSTM1Q86WC4 334 aa9.76□□□□□ -0.85
NUP54-211ENST00000512151 SCN4BQ8IWT1 228 aa9.76□□□□□ -0.85
NUP54-211ENST00000512151 CHPFQ8IZ52 775 aa9.76□□□□□ -0.85
NUP54-211ENST00000512151 KIAA1958Q8N8K9 716 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms