RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 CREG2Q8IUH2 290 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 CCDC50Q8IVM0 306 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 SIX6OS1Q8N1H7 587 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 LRRC43Q8N309 656 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 TMEM199Q8N511 208 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 GPR161Q8N6U8 529 aaKnown RBP8.5□□□□□ -1.05
HTT-209ENST00000512068 ANKRD52Q8NB46 1076 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 SLC2A14Q8TDB8 520 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 DIS3LQ8TF46 1054 aaKnown RBP8.5□□□□□ -1.05
HTT-209ENST00000512068 MAIP1Q8WWC4 291 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 LINC01599Q8WXQ3 324 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 PAWRQ96IZ0 340 aaKnown RBP8.5□□□□□ -1.05
HTT-209ENST00000512068 CPXM1Q96SM3 734 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 NCAPGQ9BPX3 1015 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.5□□□□□ -1.054e-8■■□□□ 12.6
HTT-209ENST00000512068 LRRC4Q9HBW1 653 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 ABCB6Q9NP58 842 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 AAASQ9NRG9 546 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 TBC1D13Q9NVG8 400 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 ASNSD1Q9NWL6 643 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 CACNG4Q9UBN1 327 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 PRG3Q9Y2Y8 225 aaPredicted RBP8.5□□□□□ -1.05
HTT-209ENST00000512068 CARNS1A5YM72 827 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 SIGLEC16A6NMB1 481 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 E5RJQ4 531 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 CCDC188H7C350 402 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 TMEM189-UBE2V1I3L0A0 370 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 KRIT1O00522 736 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 XPO1O14980 1071 aaKnown RBP8.49□□□□□ -1.05
HTT-209ENST00000512068 DDX3YO15523 660 aaKnown RBP8.49□□□□□ -1.05
HTT-209ENST00000512068 ERLIN1O75477 346 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 CXCL10P02778 98 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 AMHP03971 560 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 ERBB2P04626 1255 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 RHOXF2BP0C7M4 288 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 LCP1P13796 627 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 NPR3P17342 541 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 GPD1P21695 349 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 LMO2P25791 158 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 BRCC3P46736 316 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 GABRB2P47870 512 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 AARSP49588 968 aaKnown RBP eCLIP8.49□□□□□ -1.05
HTT-209ENST00000512068 AFF1P51825 1210 aaKnown RBP8.49□□□□□ -1.05
HTT-209ENST00000512068 RNASE9P60153 205 aaKnown RBP8.49□□□□□ -1.05
HTT-209ENST00000512068 YWHAHQ04917 246 aaPredicted RBP8.49□□□□□ -1.05
HTT-209ENST00000512068 ELAVL2Q12926 359 aaKnown RBP8.49□□□□□ -1.05
HTT-209ENST00000512068 TIGD5Q53EQ6 642 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 CLLU1OSQ5K130 101 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 C4orf50Q6ZRC1 276 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 RTN4RL1Q86UN2 441 aaPredicted RBP8.49□□□□□ -1.05
HTT-209ENST00000512068 XYLT1Q86Y38 959 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 COLGALT2Q8IYK4 626 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 DCP1BQ8IZD4 617 aaKnown RBP8.49□□□□□ -1.05
HTT-209ENST00000512068 WDTC1Q8N5D0 677 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 DNAJC5GQ8N7S2 189 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 TSEN2Q8NCE0 465 aaKnown RBP8.49□□□□□ -1.05
HTT-209ENST00000512068 SPATA4Q8NEY3 305 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 ACTRT1Q8TDG2 376 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 SMARCD1Q96GM5 515 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 RBM41Q96IZ5 413 aaKnown RBP8.49□□□□□ -1.05
HTT-209ENST00000512068 SUSD3Q96L08 255 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 HSFY1Q96LI6 401 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 RNPC3Q96LT9 517 aaKnown RBP8.49□□□□□ -1.05
HTT-209ENST00000512068 HNRNPABQ99729 332 aaKnown RBP8.49□□□□□ -1.05
HTT-209ENST00000512068 RHOXF2Q9BQY4 288 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 ACBD6Q9BR61 282 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 DUSP16Q9BY84 665 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 KRT82Q9NSB4 513 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 DDX56Q9NY93 547 aaKnown RBP8.49□□□□□ -1.05
HTT-209ENST00000512068 FAN1Q9Y2M0 1017 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 TIMM13Q9Y5L4 95 aaPredicted RBP8.49□□□□□ -1.05
HTT-209ENST00000512068 TSC2P49815 1807 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 TTC3P53804 2025 aa8.49□□□□□ -1.05
HTT-209ENST00000512068 SF3B1O75533 1304 aaKnown RBP eCLIP8.49□□□□□ -1.057e-12■■■■■ 77.5
HTT-209ENST00000512068 ABHD14A-ACY1A0A1B0GW23 586 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 TMEM191CA6NGB0 347 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 I3L4J1 428 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 M0QZQ0 153 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 MEN1O00255 615 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 PIK3R2O00459 728 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 GABRDO14764 452 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 SYN3O14994 580 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 SART1O43290 800 aaKnown RBP8.48□□□□□ -1.05
HTT-209ENST00000512068 FBXO21O94952 628 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 FGGP02679 453 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 KRT1P04264 644 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 ALDH2P05091 517 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 CYP11A1P05108 521 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 PFKMP08237 780 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 KRT7P08729 469 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 SDC4P31431 198 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 GPC1P35052 558 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 PLA2G4AP47712 749 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 EPHA4P54764 986 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 SLC6A3Q01959 620 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 PLCB3Q01970 1234 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 DSC1Q08554 894 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 ZNF211Q13398 564 aaPredicted RBP8.48□□□□□ -1.05
HTT-209ENST00000512068 ACAP1Q15027 740 aa8.48□□□□□ -1.05
HTT-209ENST00000512068 MAP9Q49MG5 647 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms